C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L17
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000615760 RPL17-024 ENSG00000265681 9606 - 18:49489471-49492428 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005840 IEA ribosome
GO:0006412 IEA translation
GO:0015934 IEA large ribosomal subunit

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000120241 Rpl17-ps4-001 processed_pseudogene Mus_musculus 0 503
ENSMUST00000121001 Rpl17-ps5-001 processed_pseudogene Mus_musculus 0 503
ENSMUST00000119383 Rpl17-ps10-001 processed_pseudogene Mus_musculus 0 497
ENSMUST00000118924 Rpl17-ps8-001 processed_pseudogene Mus_musculus 0 497
ENSMUST00000079716 Rpl17-201 protein_coding Mus_musculus 0 497
ENSMUST00000119541 Rpl17-ps9-001 processed_pseudogene Mus_musculus 0 486
ENSMUST00000085340 Gm10268-201 processed_pseudogene Mus_musculus 0 481
ENSMUST00000173076 Gm3617-001 processed_pseudogene Mus_musculus 0 475
ENSMUST00000139696 Gm8062-001 processed_pseudogene Mus_musculus 0 464
ENSMUST00000119156 Rpl17-ps1-001 processed_pseudogene Mus_musculus 0 449
ENSMUST00000164501 Gm17214-001 processed_pseudogene Mus_musculus 0 448
ENSMUST00000119012 Gm12380-001 processed_pseudogene Mus_musculus 0 440
ENSMUST00000185778 RP24-178O17.1-001 processed_pseudogene Mus_musculus 0 438
ENSMUST00000121305 Gm11472-001 processed_pseudogene Mus_musculus 0 420
ENSMUST00000189856 RP23-110B5.4-001 processed_pseudogene Mus_musculus 0 412
ENSMUST00000119137 Gm15497-001 processed_pseudogene Mus_musculus 0 405
ENSMUST00000146593 Gm15843-001 processed_pseudogene Mus_musculus 0 387
ENSMUST00000185744 RP23-304F24.3-001 processed_pseudogene Mus_musculus 0 375
ENSMUST00000120830 Gm13665-001 processed_pseudogene Mus_musculus 0 355
ENSMUST00000121672 Gm11363-001 processed_pseudogene Mus_musculus 0 344
ENSMUST00000164923 Gm5277-201 protein_coding Mus_musculus 0 344
ENSMUST00000117144 Gm6429-001 processed_pseudogene Mus_musculus 0 335
ENSMUST00000187749 RP23-305F24.2-001 processed_pseudogene Mus_musculus 0 309
ENSMUST00000162128 Gm16111-001 processed_pseudogene Mus_musculus 5e-39 165

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