C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000471722 RP4-706A16.3-001 ENSG00000226084 9606 + 1:77129114-77129668 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonHeartLungOvaryENST00000471722
Transcript ID Adrenal Colon Heart Lung Ovary
ENST00000471722 0.027±0.00 0.258±0.00 0.024±0.00 0.025±0.00 1.014±0.91

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000121001 Rpl17-ps5-001 processed_pseudogene Mus_musculus 0 732
ENSMUST00000118924 Rpl17-ps8-001 processed_pseudogene Mus_musculus 0 726
ENSMUST00000079716 Rpl17-201 protein_coding Mus_musculus 0 726
ENSMUST00000119541 Rpl17-ps9-001 processed_pseudogene Mus_musculus 0 715
ENSMUST00000120241 Rpl17-ps4-001 processed_pseudogene Mus_musculus 0 710
ENSMUST00000119383 Rpl17-ps10-001 processed_pseudogene Mus_musculus 0 704
ENSMUST00000085340 Gm10268-201 processed_pseudogene Mus_musculus 0 704
ENSMUST00000117614 Gm11531-001 processed_pseudogene Mus_musculus 0 688
ENSMUST00000173076 Gm3617-001 processed_pseudogene Mus_musculus 0 688
ENSMUST00000119156 Rpl17-ps1-001 processed_pseudogene Mus_musculus 0 645
ENSMUST00000162765 Gm9719-001 processed_pseudogene Mus_musculus 0 627
ENSMUST00000185778 RP24-178O17.1-001 processed_pseudogene Mus_musculus 0 625
ENSMUST00000160969 Gm15795-001 processed_pseudogene Mus_musculus 0 623
ENSMUST00000119731 Gm4986-001 processed_pseudogene Mus_musculus 0 621
ENSMUST00000121305 Gm11472-001 processed_pseudogene Mus_musculus 0 621
ENSMUST00000120579 Gm11343-001 processed_pseudogene Mus_musculus 0 603
ENSMUST00000189856 RP23-110B5.4-001 processed_pseudogene Mus_musculus 0 601
ENSMUST00000119137 Gm15497-001 processed_pseudogene Mus_musculus 0 595
ENSMUST00000164501 Gm17214-001 processed_pseudogene Mus_musculus 0 586
ENSMUST00000146593 Gm15843-001 processed_pseudogene Mus_musculus 0 580
ENSMUST00000185744 RP23-304F24.3-001 processed_pseudogene Mus_musculus 0 551
ENSMUST00000139696 Gm8062-001 processed_pseudogene Mus_musculus 0 532
ENSMUST00000120830 Gm13665-001 processed_pseudogene Mus_musculus 0 529
ENSMUST00000119012 Gm12380-001 processed_pseudogene Mus_musculus 0 494
ENSMUST00000164923 Gm5277-201 protein_coding Mus_musculus 0 466
ENSMUST00000187749 RP23-305F24.2-001 processed_pseudogene Mus_musculus 0 460
ENSMUST00000121672 Gm11363-001 processed_pseudogene Mus_musculus 0 457
ENSMUST00000117144 Gm6429-001 processed_pseudogene Mus_musculus 0 420
ENSMUST00000162128 Gm16111-001 processed_pseudogene Mus_musculus 0 344

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