C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000416091 AC007272.3-001 ENSG00000224672 9606 - 2:201102089-201102957 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastKidneyLungOvaryPlacentaTestisENST00000416091
Transcript ID Adrenal Brain Breast Kidney Lung Ovary Placenta Testis
ENST00000416091 0.729±0.00 0.097±0.00 0.755±0.00 0.108±0.00 0.343±0.11 0.076±0.02 0.057±0.00 0.133±0.03

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000121001 Rpl17-ps5-001 processed_pseudogene Mus_musculus 0 429
ENSMUST00000118924 Rpl17-ps8-001 processed_pseudogene Mus_musculus 0 424
ENSMUST00000079716 Rpl17-201 protein_coding Mus_musculus 0 424
ENSMUST00000119383 Rpl17-ps10-001 processed_pseudogene Mus_musculus 0 418
ENSMUST00000120241 Rpl17-ps4-001 processed_pseudogene Mus_musculus 0 418
ENSMUST00000085340 Gm10268-201 processed_pseudogene Mus_musculus 0 414
ENSMUST00000119541 Rpl17-ps9-001 processed_pseudogene Mus_musculus 0 412
ENSMUST00000173076 Gm3617-001 processed_pseudogene Mus_musculus 0 385
ENSMUST00000119156 Rpl17-ps1-001 processed_pseudogene Mus_musculus 0 359
ENSMUST00000164501 Gm17214-001 processed_pseudogene Mus_musculus 0 357
ENSMUST00000162765 Gm9719-001 processed_pseudogene Mus_musculus 0 353
ENSMUST00000146593 Gm15843-001 processed_pseudogene Mus_musculus 0 351
ENSMUST00000185744 RP23-304F24.3-001 processed_pseudogene Mus_musculus 0 344
ENSMUST00000139696 Gm8062-001 processed_pseudogene Mus_musculus 0 339
ENSMUST00000189856 RP23-110B5.4-001 processed_pseudogene Mus_musculus 0 326
ENSMUST00000119012 Gm12380-001 processed_pseudogene Mus_musculus 0 324
ENSMUST00000120830 Gm13665-001 processed_pseudogene Mus_musculus 0 318
ENSMUST00000119137 Gm15497-001 processed_pseudogene Mus_musculus 0 303
ENSMUST00000121960 Gm14441-001 processed_pseudogene Mus_musculus 0 298
ENSMUST00000117144 Gm6429-001 processed_pseudogene Mus_musculus 0 241
ENSMUST00000121672 Gm11363-001 processed_pseudogene Mus_musculus 0 233
ENSMUST00000164923 Gm5277-201 protein_coding Mus_musculus 0 228

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