C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 6429
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117144 Gm6429-001 ENSMUSG00000083103 10090 - X:112822222-112822696 processed_pseudogene

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003KH CIL_0003KH_0002 CGP X:112638431-113185517

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000332968 RPL17-C18orf32-003 protein_coding Homo_sapiens 0 364
ENST00000391360 RP11-347C18.1-001 processed_pseudogene Homo_sapiens 0 329
ENST00000394133 RP11-624L12.1-001 processed_pseudogene Homo_sapiens 0 353
ENST00000404330 RPL17P25-001 processed_pseudogene Homo_sapiens 0 342
ENST00000407033 RPL17P26-001 processed_pseudogene Homo_sapiens 0 359
ENST00000414070 RP11-20O24.4-001 processed_pseudogene Homo_sapiens 0 409
ENST00000416091 AC007272.3-001 processed_pseudogene Homo_sapiens 0 241
ENST00000418495 RPL17-201 protein_coding Homo_sapiens 0 425
ENST00000420302 RP11-215A21.2-001 processed_pseudogene Homo_sapiens 0 392
ENST00000429934 RP11-383F6.1-001 processed_pseudogene Homo_sapiens 9.80909e-45 183
ENST00000443728 RPL17P49-001 processed_pseudogene Homo_sapiens 1e-28 130
ENST00000444020 RP11-1029M24.1-001 processed_pseudogene Homo_sapiens 0 327
ENST00000445304 RPL17P1-001 processed_pseudogene Homo_sapiens 0 252
ENST00000445757 AC007677.2-001 processed_pseudogene Homo_sapiens 0 237
ENST00000446498 RP3-476K8.4-001 processed_pseudogene Homo_sapiens 0 350
ENST00000448403 RP11-383G10.3-001 processed_pseudogene Homo_sapiens 0 353
ENST00000461464 RPL17P20-001 processed_pseudogene Homo_sapiens 0 305
ENST00000467688 RPL17P22-001 processed_pseudogene Homo_sapiens 0 359
ENST00000469329 RPL17P41-001 processed_pseudogene Homo_sapiens 0 302
ENST00000471722 RP4-706A16.3-001 processed_pseudogene Homo_sapiens 0 420
ENST00000483964 RP11-7F18.1-001 processed_pseudogene Homo_sapiens 0 300
ENST00000491913 RPL17P2-001 processed_pseudogene Homo_sapiens 0 250
ENST00000498103 RP11-592N21.1-001 processed_pseudogene Homo_sapiens 0 414
ENST00000498256 RPL17P33-001 processed_pseudogene Homo_sapiens 0 392
ENST00000511559 RP11-115A14.1-001 processed_pseudogene Homo_sapiens 4e-39 165
ENST00000524791 RP11-757C15.4-001 processed_pseudogene Homo_sapiens 4.06377e-44 182
ENST00000560214 RP11-14C10.2-001 processed_pseudogene Homo_sapiens 3e-26 122
ENST00000577910 RPL17-C18orf32-002 nonsense_mediated_decay Homo_sapiens 0 425
ENST00000578532 RPL17-017 protein_coding Homo_sapiens 0 425
ENST00000579248 RPL17-018 protein_coding Homo_sapiens 0 425
ENST00000579408 RPL17-003 protein_coding Homo_sapiens 0 425
ENST00000579820 C18orf32-201 protein_coding Homo_sapiens 0 364
ENST00000580210 RPL17-015 protein_coding Homo_sapiens 0 409
ENST00000580261 RPL17-001 protein_coding Homo_sapiens 0 425
ENST00000580387 RPL17-019 protein_coding Homo_sapiens 0 335
ENST00000581091 RPL17-012 processed_transcript Homo_sapiens 0 370
ENST00000581373 RPL17-002 protein_coding Homo_sapiens 0 364
ENST00000581741 RPL17-009 retained_intron Homo_sapiens 0 270
ENST00000582935 RPL17-013 retained_intron Homo_sapiens 0 222
ENST00000583036 RPL17-008 protein_coding Homo_sapiens 0 355
ENST00000583637 RPL17-016 protein_coding Homo_sapiens 0 425
ENST00000584364 RPL17-014 retained_intron Homo_sapiens 0 368
ENST00000584895 RPL17-C18orf32-001 protein_coding Homo_sapiens 0 425
ENST00000596405 CTD-2550O8.7-001 processed_pseudogene Homo_sapiens 0 281
ENST00000615479 RPL17-025 protein_coding Homo_sapiens 0 237
ENST00000615760 RPL17-024 protein_coding Homo_sapiens 0 335
ENST00000617346 RPL17-022 protein_coding Homo_sapiens 0 425
ENST00000618613 RPL17-202 protein_coding Homo_sapiens 0 425
ENST00000618619 RPL17-023 protein_coding Homo_sapiens 0 425

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