C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 15497
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119137 Gm15497-001 ENSMUSG00000081142 10090 + 5:138610739-138611289 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000119137
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000119137 1.900±0.50 0.474±0.19 0.426±0.07 1.125±0.40 0.981±0.46 1.173±0.27 0.992±0.61 0.286±0.13 1.532±0.64 0.219±0.09 1.235±0.48 0.263±0.07 0.280±0.05

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000332968 RPL17-C18orf32-003 protein_coding Homo_sapiens 0 462
ENST00000391360 RP11-347C18.1-001 processed_pseudogene Homo_sapiens 0 466
ENST00000396131 RPL17P50-001 processed_pseudogene Homo_sapiens 0 457
ENST00000404330 RPL17P25-001 processed_pseudogene Homo_sapiens 0 472
ENST00000404382 RP3-472M2.2-001 processed_pseudogene Homo_sapiens 0 209
ENST00000407033 RPL17P26-001 processed_pseudogene Homo_sapiens 0 516
ENST00000414070 RP11-20O24.4-001 processed_pseudogene Homo_sapiens 0 584
ENST00000416091 AC007272.3-001 processed_pseudogene Homo_sapiens 0 303
ENST00000417063 AC020983.5-001 processed_pseudogene Homo_sapiens 0 453
ENST00000418495 RPL17-201 protein_coding Homo_sapiens 0 595
ENST00000420302 RP11-215A21.2-001 processed_pseudogene Homo_sapiens 0 556
ENST00000443728 RPL17P49-001 processed_pseudogene Homo_sapiens 3e-29 132
ENST00000444020 RP11-1029M24.1-001 processed_pseudogene Homo_sapiens 0 505
ENST00000445757 AC007677.2-001 processed_pseudogene Homo_sapiens 0 265
ENST00000446498 RP3-476K8.4-001 processed_pseudogene Homo_sapiens 0 503
ENST00000447415 RP4-612B15.2-001 processed_pseudogene Homo_sapiens 0 534
ENST00000448403 RP11-383G10.3-001 processed_pseudogene Homo_sapiens 0 503
ENST00000461464 RPL17P20-001 processed_pseudogene Homo_sapiens 0 451
ENST00000467688 RPL17P22-001 processed_pseudogene Homo_sapiens 0 503
ENST00000471722 RP4-706A16.3-001 processed_pseudogene Homo_sapiens 0 595
ENST00000483964 RP11-7F18.1-001 processed_pseudogene Homo_sapiens 0 409
ENST00000485656 RP11-273P3.1-001 processed_pseudogene Homo_sapiens 0 204
ENST00000488371 RP11-864J10.2-001 processed_pseudogene Homo_sapiens 0 350
ENST00000488887 AF131215.1-001 processed_pseudogene Homo_sapiens 0 296
ENST00000491913 RPL17P2-001 processed_pseudogene Homo_sapiens 0 324
ENST00000498256 RPL17P33-001 processed_pseudogene Homo_sapiens 0 531
ENST00000524791 RP11-757C15.4-001 processed_pseudogene Homo_sapiens 0 231
ENST00000577910 RPL17-C18orf32-002 nonsense_mediated_decay Homo_sapiens 0 595
ENST00000578532 RPL17-017 protein_coding Homo_sapiens 0 551
ENST00000579248 RPL17-018 protein_coding Homo_sapiens 0 595
ENST00000579408 RPL17-003 protein_coding Homo_sapiens 0 595
ENST00000579820 C18orf32-201 protein_coding Homo_sapiens 0 462
ENST00000580210 RPL17-015 protein_coding Homo_sapiens 0 556
ENST00000580261 RPL17-001 protein_coding Homo_sapiens 0 595
ENST00000580387 RPL17-019 protein_coding Homo_sapiens 0 396
ENST00000581091 RPL17-012 processed_transcript Homo_sapiens 0 464
ENST00000581373 RPL17-002 protein_coding Homo_sapiens 0 518
ENST00000581741 RPL17-009 retained_intron Homo_sapiens 0 298
ENST00000582935 RPL17-013 retained_intron Homo_sapiens 0 276
ENST00000583036 RPL17-008 protein_coding Homo_sapiens 0 435
ENST00000583637 RPL17-016 protein_coding Homo_sapiens 0 562
ENST00000584364 RPL17-014 retained_intron Homo_sapiens 0 521
ENST00000584895 RPL17-C18orf32-001 protein_coding Homo_sapiens 0 540
ENST00000596405 CTD-2550O8.7-001 processed_pseudogene Homo_sapiens 0 353
ENST00000605218 RPL17P51-001 processed_pseudogene Homo_sapiens 0.0000000000002 79
ENST00000615479 RPL17-025 protein_coding Homo_sapiens 0 318
ENST00000615760 RPL17-024 protein_coding Homo_sapiens 0 405
ENST00000617346 RPL17-022 protein_coding Homo_sapiens 0 540
ENST00000618613 RPL17-202 protein_coding Homo_sapiens 0 595
ENST00000618619 RPL17-023 protein_coding Homo_sapiens 0 595

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