Transcript ID | Adipose | Adrenal | Brain | Heart | Liver | Lung | Testis |
---|---|---|---|---|---|---|---|
ENST00000448905 | 3.597±0.00 | 3.026±0.00 | 5.754±0.00 | 1.153±0.00 | 10.267±0.00 | 2.096±0.00 | 8.005±0.00 |
Transcript Info |
||||||
Description: | high mobility group box 3 | |||||
---|---|---|---|---|---|---|
Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000448905 | HMGB3-201 | ENSG00000029993 | 9606 | + | X:150983406-150987932 | protein_coding |
Expression Patterns
|
Conserved Regions | |||
---|---|---|---|
Region ID | Sub-Region | Region Type | Position |
CIL_0000UN | CIL_0000UN_0002 | CGP | X:150766337-150990775 |
CIL_0009DG | CIL_0009DG_0001 | VISTA | X:150939220-151540580 |
CIL_0001AV | CIL_0001AV_0001 | CGP | X:150980509-151181465 |
Gene Ontology | ||
---|---|---|
GO ID | Evidence Type | GO Description |
GO:0003677 | IEA | DNA binding |
GO:0003690 | ISS | double-stranded DNA binding |
GO:0005634 | IEA | nucleus |
GO:0005694 | IEA | chromosome |
GO:0006310 | ISS | DNA recombination |
GO:0007275 | TAS | multicellular organismal development |
GO:0008301 | ISS | DNA binding, bending |
GO:0044822 | IDA | poly(A) RNA binding |
Homologs | |||||
ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
ENSMUST00000114582 | Hmgb3-003 | protein_coding | Mus_musculus | 0 | 961 |
ENSMUST00000072699 | Hmgb3-001 | protein_coding | Mus_musculus | 0 | 857 |
ENSMUST00000088874 | Hmgb3-004 | protein_coding | Mus_musculus | 0 | 856 |
ENSMUST00000015361 | Hmgb3-002 | protein_coding | Mus_musculus | 0 | 846 |
ENSMUST00000078030 | Gm6104-201 | protein_coding | Mus_musculus | 0 | 832 |
ENSMUST00000132145 | Hmgb3-006 | retained_intron | Mus_musculus | 0 | 808 |
ENSMUST00000121238 | Gm11805-001 | processed_pseudogene | Mus_musculus | 0 | 743 |
ENSMUST00000120072 | Gm5060-001 | processed_pseudogene | Mus_musculus | 0 | 673 |
ENSMUST00000123100 | Hmgb3-005 | protein_coding | Mus_musculus | 0 | 658 |
ENSMUST00000155930 | Gm8813-001 | processed_pseudogene | Mus_musculus | 0 | 647 |
ENSMUST00000117931 | Gm12365-001 | processed_pseudogene | Mus_musculus | 0 | 630 |
ENSMUST00000176139 | Gm18367-001 | processed_pseudogene | Mus_musculus | 0 | 599 |
ENSMUST00000117806 | Gm15576-001 | processed_pseudogene | Mus_musculus | 0 | 579 |
ENSMUST00000162465 | Hmgb3-ps-001 | processed_pseudogene | Mus_musculus | 0 | 577 |
ENSMUST00000117771 | Gm5752-001 | processed_pseudogene | Mus_musculus | 0 | 516 |
ENSMUST00000117677 | Gm13386-001 | processed_pseudogene | Mus_musculus | 4e-31 | 139 |