C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 14052
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121434 Gm14052-001 ENSMUSG00000082990 10090 + 2:132099869-132100899 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000121434
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000121434 0.514±0.34 1.037±0.57 0.394±0.11 0.532±0.34 1.034±0.39 1.493±1.05 0.333±0.12 0.299±0.11 0.101±0.05 1.490±0.33 0.864±0.59 0.313±0.16 0.175±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004S5 CIL_0004S5_0002 CGP 2:131989415-132145108
CIL_0003LV CIL_0003LV_0002 CGP 2:132052496-132247807

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000392524 HNRNPA3-001 protein_coding Homo_sapiens 0 891
ENST00000401429 HNRNPA3P1-001 processed_pseudogene Homo_sapiens 0 808
ENST00000411529 HNRNPA3-002 protein_coding Homo_sapiens 0 891
ENST00000416838 HNRNPA3P3-001 processed_pseudogene Homo_sapiens 0 776
ENST00000424470 HNRNPA3P15-001 processed_pseudogene Homo_sapiens 0 507
ENST00000424736 RP11-512F24.1-001 processed_pseudogene Homo_sapiens 0 1369
ENST00000427514 HNRNPA3P4-001 processed_pseudogene Homo_sapiens 0 749
ENST00000432457 HNRNPA3-008 protein_coding Homo_sapiens 0 244
ENST00000435711 HNRNPA3-014 protein_coding Homo_sapiens 0 891
ENST00000437410 HNRNPA3P12-001 processed_pseudogene Homo_sapiens 0 745
ENST00000441511 AC012513.4-001 processed_pseudogene Homo_sapiens 0 370
ENST00000451198 HNRNPA3P2-001 unprocessed_pseudogene Homo_sapiens 0 381
ENST00000455201 HNRNPA3P5-001 processed_pseudogene Homo_sapiens 0 521
ENST00000472163 HNRNPA3P6-001 processed_pseudogene Homo_sapiens 0 1301
ENST00000483137 HNRNPA3-012 retained_intron Homo_sapiens 4.99997e-41 172
ENST00000507583 RP11-395I6.1-001 processed_pseudogene Homo_sapiens 2e-23 111
ENST00000512222 HNRNPA3P13-001 processed_pseudogene Homo_sapiens 0 660
ENST00000547726 HNRNPA3P10-001 processed_pseudogene Homo_sapiens 0 791
ENST00000564298 HNRNPA3P11-001 processed_pseudogene Homo_sapiens 0 584
ENST00000619693 CTD-3093M3.1-001 unprocessed_pseudogene Homo_sapiens 2e-20 100

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