C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000479658 AC114752.2-001 ENSG00000236148 9606 - 2:64347193-64347741 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLungMuscleOvaryTestisENST00000479658
Transcript ID Adipose Adrenal Brain Breast Colon Heart Lung Muscle Ovary Testis
ENST00000479658 0.056±0.00 0.386±0.00 0.123±0.06 0.210±0.00 0.169±0.00 0.078±0.00 0.028±0.00 0.227±0.00 0.045±0.00 0.151±0.11

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102483 Rpl23a-001 protein_coding Mus_musculus 0 579
ENSMUST00000104925 Rpl23a-ps3-201 protein_coding Mus_musculus 0 569
ENSMUST00000127270 Rpl23a-002 retained_intron Mus_musculus 0 544
ENSMUST00000096020 Gm10335-001 processed_pseudogene Mus_musculus 0 518
ENSMUST00000099431 Gm10132-001 processed_pseudogene Mus_musculus 0 518
ENSMUST00000078729 Gm20900-201 processed_pseudogene Mus_musculus 0 510
ENSMUST00000148102 Gm3362-001 processed_pseudogene Mus_musculus 0 503
ENSMUST00000180011 Gm8112-201 processed_pseudogene Mus_musculus 0 499
ENSMUST00000120313 Gm5384-001 processed_pseudogene Mus_musculus 0 492
ENSMUST00000118798 Gm7312-001 processed_pseudogene Mus_musculus 0 483
ENSMUST00000085589 Gm6177-001 processed_pseudogene Mus_musculus 0 468
ENSMUST00000121781 Gm12094-001 processed_pseudogene Mus_musculus 0 436
ENSMUST00000119136 Gm8217-001 processed_pseudogene Mus_musculus 0 424
ENSMUST00000118777 Rpl23a-ps14-001 processed_pseudogene Mus_musculus 0 420
ENSMUST00000105085 Gm10923-001 processed_pseudogene Mus_musculus 0 401
ENSMUST00000121605 Gm12322-001 processed_pseudogene Mus_musculus 0 392
ENSMUST00000085632 Rpl23a-ps1-001 processed_pseudogene Mus_musculus 0 388
ENSMUST00000121008 Rpl23a-ps4-001 processed_pseudogene Mus_musculus 0 375
ENSMUST00000178439 Gm21959-201 processed_pseudogene Mus_musculus 0 372
ENSMUST00000105087 Gm3940-001 processed_pseudogene Mus_musculus 0 368
ENSMUST00000177167 Gm20673-001 processed_pseudogene Mus_musculus 0 361
ENSMUST00000187124 RP23-466F9.2-001 processed_pseudogene Mus_musculus 0 353
ENSMUST00000187732 RP23-349I9.17-001 processed_pseudogene Mus_musculus 0 339
ENSMUST00000105172 Gm6096-201 protein_coding Mus_musculus 0 339
ENSMUST00000187903 RP23-349I9.24-001 processed_pseudogene Mus_musculus 0 335
ENSMUST00000191583 Rpl23a-ps11-001 processed_pseudogene Mus_musculus 0 329
ENSMUST00000187984 RP23-349I9.11-001 processed_pseudogene Mus_musculus 0 327
ENSMUST00000187331 RP23-466F9.8-001 processed_pseudogene Mus_musculus 0 324
ENSMUST00000189660 RP23-466F9.10-001 processed_pseudogene Mus_musculus 0 324
ENSMUST00000188369 Rpl23a-ps9-001 processed_pseudogene Mus_musculus 0 324
ENSMUST00000185244 RP23-349I9.15-001 processed_pseudogene Mus_musculus 0 324
ENSMUST00000185511 Rpl23a-ps10-001 processed_pseudogene Mus_musculus 0 307
ENSMUST00000186898 RP23-466F9.4-001 processed_pseudogene Mus_musculus 0 302
ENSMUST00000161498 Gm16303-001 processed_pseudogene Mus_musculus 0 300
ENSMUST00000120350 Rpl23a-ps13-001 processed_pseudogene Mus_musculus 0 278
ENSMUST00000119619 Gm7219-001 processed_pseudogene Mus_musculus 0 263
ENSMUST00000144561 Rpl23a-003 retained_intron Mus_musculus 0 257
ENSMUST00000119323 Gm11928-001 processed_pseudogene Mus_musculus 0 193
ENSMUST00000092880 Tlcd1-007 protein_coding Mus_musculus 0 191
ENSMUST00000118608 Gm11935-001 processed_pseudogene Mus_musculus 1e-24 117

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