C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000488887 AF131215.1-001 ENSG00000231965 9606 + 8:11175051-11175570 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalHeartTestisENST00000488887
Transcript ID Adrenal Heart Testis
ENST00000488887 0.052±0.00 0.023±0.00 0.133±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000117614 Gm11531-001 processed_pseudogene Mus_musculus 0 381
ENSMUST00000118924 Rpl17-ps8-001 processed_pseudogene Mus_musculus 0 377
ENSMUST00000121001 Rpl17-ps5-001 processed_pseudogene Mus_musculus 0 377
ENSMUST00000079716 Rpl17-201 protein_coding Mus_musculus 0 377
ENSMUST00000120241 Rpl17-ps4-001 processed_pseudogene Mus_musculus 0 372
ENSMUST00000085340 Gm10268-201 processed_pseudogene Mus_musculus 0 372
ENSMUST00000119541 Rpl17-ps9-001 processed_pseudogene Mus_musculus 0 366
ENSMUST00000119383 Rpl17-ps10-001 processed_pseudogene Mus_musculus 0 363
ENSMUST00000173076 Gm3617-001 processed_pseudogene Mus_musculus 0 350
ENSMUST00000119156 Rpl17-ps1-001 processed_pseudogene Mus_musculus 0 344
ENSMUST00000162765 Gm9719-001 processed_pseudogene Mus_musculus 0 333
ENSMUST00000160969 Gm15795-001 processed_pseudogene Mus_musculus 0 329
ENSMUST00000146593 Gm15843-001 processed_pseudogene Mus_musculus 0 298
ENSMUST00000119137 Gm15497-001 processed_pseudogene Mus_musculus 0 296
ENSMUST00000139696 Gm8062-001 processed_pseudogene Mus_musculus 0 283
ENSMUST00000164501 Gm17214-001 processed_pseudogene Mus_musculus 0 278
ENSMUST00000120579 Gm11343-001 processed_pseudogene Mus_musculus 0 265
ENSMUST00000120830 Gm13665-001 processed_pseudogene Mus_musculus 0 257
ENSMUST00000119012 Gm12380-001 processed_pseudogene Mus_musculus 0 213
ENSMUST00000118067 Gm11380-001 processed_pseudogene Mus_musculus 0 189
ENSMUST00000185744 RP23-304F24.3-001 processed_pseudogene Mus_musculus 1e-39 167
ENSMUST00000118454 Gm11558-001 processed_pseudogene Mus_musculus 7e-22 108

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