C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000548998 KRT8-014 ENSG00000170421 9606 - 12:52900008-52949776 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENST00000548998
Transcript ID Muscle
ENST00000548998 2.038±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00038V CIL_00038V_0001 CGP 12:52837804-52949954
CIL_0006T8 CIL_0006T8_0001 CGP 12:52897187-52952901

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005882 IEA intermediate filament
GO:0045095 IEA keratin filament

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023952 Krt8-201 protein_coding Mus_musculus 0 859
ENSMUST00000023714 4732456N10Rik-001 protein_coding Mus_musculus 0 274
ENSMUST00000023709 Krt5-001 protein_coding Mus_musculus 0 263
ENSMUST00000023786 Krt6b-201 protein_coding Mus_musculus 0 219
ENSMUST00000068904 Krt7-001 protein_coding Mus_musculus 0 219
ENSMUST00000023788 Krt6a-201 protein_coding Mus_musculus 0 217
ENSMUST00000023799 Krt79-001 protein_coding Mus_musculus 1.4013e-45 187
ENSMUST00000147662 Krt7-003 protein_coding Mus_musculus 2e-40 171
ENSMUST00000087996 Krt77-001 protein_coding Mus_musculus 2e-39 167
ENSMUST00000100184 Gm5478-201 protein_coding Mus_musculus 9e-38 161
ENSMUST00000100179 Krt76-001 protein_coding Mus_musculus 3e-37 159
ENSMUST00000131069 Krt7-002 retained_intron Mus_musculus 3e-37 159
ENSMUST00000023720 Krt84-201 protein_coding Mus_musculus 2e-35 154
ENSDART00000028270 gfap-001 protein_coding Danio_rerio 0.0000004 60

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