C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: actin, beta 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000135318 actb1-006 ENSDARG00000037746 7955 - 1:7726510-7728732 retained_intron

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000075161 Actg2-001 protein_coding Mus_musculus 0 305
ENSMUST00000090269 Actc1-001 protein_coding Mus_musculus 0 298
ENSMUST00000100497 Actb-001 protein_coding Mus_musculus 0 411
ENSMUST00000106216 Actb-006 protein_coding Mus_musculus 0 411
ENSMUST00000119663 Gm4760-001 processed_pseudogene Mus_musculus 0 241
ENSMUST00000121731 Actg2-002 protein_coding Mus_musculus 0 305
ENSMUST00000124933 Actg2-006 processed_transcript Mus_musculus 0 191
ENSMUST00000141904 Actg2-005 protein_coding Mus_musculus 0 305
ENSMUST00000152029 Actg2-004 protein_coding Mus_musculus 0 305
ENSMUST00000164765 Actb-005 retained_intron Mus_musculus 0 303
ENSMUST00000165629 Actb-008 retained_intron Mus_musculus 0 414
ENSMUST00000167386 Actb-003 processed_transcript Mus_musculus 0 412
ENSMUST00000171419 Actb-007 protein_coding Mus_musculus 0 411
ENST00000345517 ACTG2-001 protein_coding Homo_sapiens 0 324
ENST00000356920 POTEE-001 protein_coding Homo_sapiens 0 326
ENST00000357462 POTEF-201 protein_coding Homo_sapiens 0 320
ENST00000366683 ACTA1-201 protein_coding Homo_sapiens 0 294
ENST00000366684 ACTA1-001 protein_coding Homo_sapiens 0 294
ENST00000409602 POTEJ-001 protein_coding Homo_sapiens 0 331
ENST00000409624 ACTG2-002 protein_coding Homo_sapiens 0 324
ENST00000409914 POTEF-001 protein_coding Homo_sapiens 0 320
ENST00000411655 ACTBP14-001 processed_pseudogene Homo_sapiens 0 261
ENST00000425123 ACTG1P4-001 processed_pseudogene Homo_sapiens 0 215
ENST00000431536 RP4-706L14.2-001 processed_pseudogene Homo_sapiens 0 224
ENST00000438944 RP11-480I12.9-001 transcribed_processed_pseudogene Homo_sapiens 0 213
ENST00000442912 ACTG2-010 protein_coding Homo_sapiens 0 327
ENST00000451531 POTEI-001 protein_coding Homo_sapiens 0 337
ENST00000491397 AMY2B-003 processed_transcript Homo_sapiens 0 215
ENST00000502306 CTD-2313D3.1-001 processed_pseudogene Homo_sapiens 0 198

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