C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: actin, gamma 2, smooth muscle, enteric
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000124933 Actg2-006 ENSMUSG00000059430 10090 - 6:83519769-83526902 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleOvaryPlacentaENSMUST00000124933
Transcript ID Muscle Ovary Placenta
ENSMUST00000124933 0.162±0.04 19.028±8.73 2.214±1.87

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000114549 hm:zewp0073-201 protein_coding Danio_rerio 0 514
ENSDART00000062370 actc1a-001 protein_coding Danio_rerio 0 503
ENSDART00000141407 actb1-002 protein_coding Danio_rerio 0 475
ENSDART00000138324 actb1-004 protein_coding Danio_rerio 0 195
ENSDART00000133319 actb1-005 protein_coding Danio_rerio 0 195
ENSDART00000054987 actb1-001 protein_coding Danio_rerio 0 195
ENSDART00000135318 actb1-006 retained_intron Danio_rerio 0 191
ENST00000224784 ACTA2-001 protein_coding Homo_sapiens 0 425
ENST00000290378 ACTC1-001 protein_coding Homo_sapiens 0 209
ENST00000345517 ACTG2-001 protein_coding Homo_sapiens 0 606
ENST00000356920 POTEE-001 protein_coding Homo_sapiens 0 226
ENST00000357462 POTEF-201 protein_coding Homo_sapiens 0 204
ENST00000366683 ACTA1-201 protein_coding Homo_sapiens 0 248
ENST00000366684 ACTA1-001 protein_coding Homo_sapiens 0 551
ENST00000409602 POTEJ-001 protein_coding Homo_sapiens 0 226
ENST00000409624 ACTG2-002 protein_coding Homo_sapiens 0 606
ENST00000409731 ACTG2-008 protein_coding Homo_sapiens 0 606
ENST00000409914 POTEF-001 protein_coding Homo_sapiens 0 204
ENST00000409918 ACTG2-003 protein_coding Homo_sapiens 6e-35 152
ENST00000411655 ACTBP14-001 processed_pseudogene Homo_sapiens 2e-29 134
ENST00000428275 ACTG1P10-001 processed_pseudogene Homo_sapiens 0 219
ENST00000429756 ACTG2-009 nonsense_mediated_decay Homo_sapiens 0 248
ENST00000431536 RP4-706L14.2-001 processed_pseudogene Homo_sapiens 2e-35 154
ENST00000438902 ACTG2-005 nonsense_mediated_decay Homo_sapiens 0 606
ENST00000438944 RP11-480I12.9-001 transcribed_processed_pseudogene Homo_sapiens 6e-30 135
ENST00000441772 AC139143.2-001 processed_pseudogene Homo_sapiens 4e-32 143
ENST00000442912 ACTG2-010 protein_coding Homo_sapiens 0 307
ENST00000451531 POTEI-001 protein_coding Homo_sapiens 0 226
ENST00000458208 ACTA2-201 protein_coding Homo_sapiens 0 425
ENST00000473016 ACTG2-006 retained_intron Homo_sapiens 4e-35 152
ENST00000480297 ACTA2-006 processed_transcript Homo_sapiens 0 250
ENST00000564713 RP11-429P3.4-001 transcribed_processed_pseudogene Homo_sapiens 2e-35 154

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