C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: actin, gamma 2, smooth muscle, enteric
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000141904 Actg2-005 ENSMUSG00000059430 10090 - 6:83519763-83527491 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000141904
Transcript ID Adipose Adrenal Brain Breast Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000141904 51.452±46.55 0.357±0.12 0.188±0.02 1.536±0.25 1.309±0.15 1.136±0.40 0.322±0.08 0.097±0.03 64.685±17.63 1.989±0.93 45.357±5.41

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0071944 IDA cell periphery

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000114549 hm:zewp0073-201 protein_coding Danio_rerio 0 747
ENSDART00000058629 acta1b-001 protein_coding Danio_rerio 0 745
ENSDART00000062370 actc1a-001 protein_coding Danio_rerio 0 736
ENSDART00000052838 acta1a-001 protein_coding Danio_rerio 0 728
ENSDART00000109883 ACTC1 (2 of 2)-002 protein_coding Danio_rerio 0 715
ENSDART00000133319 actb1-005 protein_coding Danio_rerio 0 654
ENSDART00000054987 actb1-001 protein_coding Danio_rerio 0 654
ENSDART00000138324 actb1-004 protein_coding Danio_rerio 0 547
ENSDART00000135318 actb1-006 retained_intron Danio_rerio 0 305
ENSDART00000141407 actb1-002 protein_coding Danio_rerio 0 305
ENST00000224784 ACTA2-001 protein_coding Homo_sapiens 0 809
ENST00000290378 ACTC1-001 protein_coding Homo_sapiens 0 822
ENST00000345517 ACTG2-001 protein_coding Homo_sapiens 0 1186
ENST00000356920 POTEE-001 protein_coding Homo_sapiens 0 651
ENST00000357462 POTEF-201 protein_coding Homo_sapiens 0 628
ENST00000366683 ACTA1-201 protein_coding Homo_sapiens 0 457
ENST00000366684 ACTA1-001 protein_coding Homo_sapiens 0 798
ENST00000409602 POTEJ-001 protein_coding Homo_sapiens 0 623
ENST00000409624 ACTG2-002 protein_coding Homo_sapiens 0 1184
ENST00000409731 ACTG2-008 protein_coding Homo_sapiens 0 761
ENST00000409914 POTEF-001 protein_coding Homo_sapiens 0 628
ENST00000409918 ACTG2-003 protein_coding Homo_sapiens 0 429
ENST00000411655 ACTBP14-001 processed_pseudogene Homo_sapiens 0 351
ENST00000423183 ACTG1P12-001 processed_pseudogene Homo_sapiens 0 396
ENST00000428275 ACTG1P10-001 processed_pseudogene Homo_sapiens 0 444
ENST00000429756 ACTG2-009 nonsense_mediated_decay Homo_sapiens 0 396
ENST00000431536 RP4-706L14.2-001 processed_pseudogene Homo_sapiens 0 311
ENST00000438902 ACTG2-005 nonsense_mediated_decay Homo_sapiens 0 761
ENST00000438944 RP11-480I12.9-001 transcribed_processed_pseudogene Homo_sapiens 2.99878e-43 180
ENST00000441772 AC139143.2-001 processed_pseudogene Homo_sapiens 0 416
ENST00000442912 ACTG2-010 protein_coding Homo_sapiens 0 584
ENST00000451531 POTEI-001 protein_coding Homo_sapiens 0 640
ENST00000458208 ACTA2-201 protein_coding Homo_sapiens 0 809
ENST00000468543 ACTG2-007 retained_intron Homo_sapiens 0 220
ENST00000473016 ACTG2-006 retained_intron Homo_sapiens 0 429
ENST00000480297 ACTA2-006 processed_transcript Homo_sapiens 0 634
ENST00000564713 RP11-429P3.4-001 transcribed_processed_pseudogene Homo_sapiens 0 255

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