C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: actin, gamma 2, smooth muscle, enteric
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121731 Actg2-002 ENSMUSG00000059430 10090 - 6:83512912-83527990 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastLiverMuscleOvaryPlacentaTestisENSMUST00000121731
Transcript ID Breast Liver Muscle Ovary Placenta Testis
ENSMUST00000121731 4.191±0.00 0.323±0.18 0.217±0.09 32.056±3.34 18.222±0.00 99.834±14.94

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0071944 IDA cell periphery

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000114549 hm:zewp0073-201 protein_coding Danio_rerio 0 1064
ENSDART00000062370 actc1a-001 protein_coding Danio_rerio 0 1064
ENSDART00000109883 ACTC1 (2 of 2)-002 protein_coding Danio_rerio 0 1061
ENSDART00000066430 acta2-201 protein_coding Danio_rerio 0 1053
ENSDART00000058629 acta1b-001 protein_coding Danio_rerio 0 1037
ENSDART00000052838 acta1a-001 protein_coding Danio_rerio 0 1011
ENSDART00000141737 actb2-001 protein_coding Danio_rerio 0 981
ENSDART00000055194 actb2-007 protein_coding Danio_rerio 0 981
ENSDART00000149990 acta2-001 protein_coding Danio_rerio 0 941
ENSDART00000054987 actb1-001 protein_coding Danio_rerio 0 933
ENSDART00000133319 actb1-005 protein_coding Danio_rerio 0 702
ENSDART00000134020 actb2-003 processed_transcript Danio_rerio 0 560
ENSDART00000138324 actb1-004 protein_coding Danio_rerio 0 547
ENSDART00000148290 actb2-002 nonsense_mediated_decay Danio_rerio 0 525
ENSDART00000135318 actb1-006 retained_intron Danio_rerio 0 305
ENSDART00000141407 actb1-002 protein_coding Danio_rerio 0 305
ENST00000224784 ACTA2-001 protein_coding Homo_sapiens 0 1140
ENST00000290378 ACTC1-001 protein_coding Homo_sapiens 0 1194
ENST00000345517 ACTG2-001 protein_coding Homo_sapiens 0 1694
ENST00000356920 POTEE-001 protein_coding Homo_sapiens 0 931
ENST00000357462 POTEF-201 protein_coding Homo_sapiens 0 904
ENST00000366683 ACTA1-201 protein_coding Homo_sapiens 0 457
ENST00000366684 ACTA1-001 protein_coding Homo_sapiens 0 1079
ENST00000409602 POTEJ-001 protein_coding Homo_sapiens 0 904
ENST00000409624 ACTG2-002 protein_coding Homo_sapiens 0 1696
ENST00000409731 ACTG2-008 protein_coding Homo_sapiens 0 1271
ENST00000409914 POTEF-001 protein_coding Homo_sapiens 0 904
ENST00000409918 ACTG2-003 protein_coding Homo_sapiens 0 427
ENST00000411655 ACTBP14-001 processed_pseudogene Homo_sapiens 0 538
ENST00000423183 ACTG1P12-001 processed_pseudogene Homo_sapiens 0 627
ENST00000428275 ACTG1P10-001 processed_pseudogene Homo_sapiens 0 521
ENST00000429756 ACTG2-009 nonsense_mediated_decay Homo_sapiens 0 396
ENST00000431536 RP4-706L14.2-001 processed_pseudogene Homo_sapiens 0 518
ENST00000438902 ACTG2-005 nonsense_mediated_decay Homo_sapiens 0 1271
ENST00000438944 RP11-480I12.9-001 transcribed_processed_pseudogene Homo_sapiens 2.99878e-43 180
ENST00000441772 AC139143.2-001 processed_pseudogene Homo_sapiens 0 416
ENST00000442912 ACTG2-010 protein_coding Homo_sapiens 0 582
ENST00000451531 POTEI-001 protein_coding Homo_sapiens 0 915
ENST00000458208 ACTA2-201 protein_coding Homo_sapiens 0 1140
ENST00000468543 ACTG2-007 retained_intron Homo_sapiens 0 219
ENST00000473016 ACTG2-006 retained_intron Homo_sapiens 0 427
ENST00000480297 ACTA2-006 processed_transcript Homo_sapiens 0 634
ENST00000515712 ACTBP2-001 processed_pseudogene Homo_sapiens 0 841
ENST00000564713 RP11-429P3.4-001 transcribed_processed_pseudogene Homo_sapiens 0 255

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