C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: actin, beta pseudogene 14
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000411655 ACTBP14-001 ENSG00000229001 9606 + 10:69022778-69023866 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungMuscleTestisENST00000411655
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Muscle Testis
ENST00000411655 0.019±0.00 0.144±0.00 0.024±0.00 0.045±0.00 0.161±0.12 0.073±0.00 0.065±0.00 0.041±0.00 0.035±0.00 0.046±0.01

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000100497 Actb-001 protein_coding Mus_musculus 0 917
ENSMUST00000121430 Gm12715-001 processed_pseudogene Mus_musculus 0 833
ENSMUST00000106215 Actg1-201 protein_coding Mus_musculus 0 833
ENSMUST00000071555 Actg1-001 protein_coding Mus_musculus 0 833
ENSMUST00000082300 Gm8399-201 pseudogene Mus_musculus 0 782
ENSDART00000054987 actb1-001 protein_coding Danio_rerio 0 761
ENSMUST00000119947 Gm15725-001 transcribed_processed_pseudogene Mus_musculus 0 730
ENSMUST00000078717 Lrrc58-001 protein_coding Mus_musculus 0 730
ENSMUST00000120059 Gm5388-001 processed_pseudogene Mus_musculus 0 645
ENSDART00000133319 actb1-005 protein_coding Danio_rerio 0 640
ENSMUST00000171419 Actb-007 protein_coding Mus_musculus 0 634
ENSMUST00000090269 Actc1-001 protein_coding Mus_musculus 0 628
ENSMUST00000034453 Acta1-201 protein_coding Mus_musculus 0 616
ENSDART00000058629 acta1b-001 protein_coding Danio_rerio 0 590
ENSDART00000055136 actc1b-201 protein_coding Danio_rerio 0 579
ENSDART00000052838 acta1a-001 protein_coding Danio_rerio 0 553
ENSDART00000062370 actc1a-001 protein_coding Danio_rerio 0 547
ENSDART00000080664 protein_coding Danio_rerio 0 545
ENSMUST00000121731 Actg2-002 protein_coding Mus_musculus 0 538
ENSMUST00000075161 Actg2-001 protein_coding Mus_musculus 0 538
ENSDART00000114549 hm:zewp0073-201 protein_coding Danio_rerio 0 531
ENSMUST00000119663 Gm4760-001 processed_pseudogene Mus_musculus 0 512
ENSMUST00000128055 Actg1-005 protein_coding Mus_musculus 0 497
ENSDART00000138324 actb1-004 protein_coding Danio_rerio 0 490
ENSMUST00000106216 Actb-006 protein_coding Mus_musculus 0 403
ENSMUST00000165006 Gm17228-001 processed_pseudogene Mus_musculus 0 353
ENSMUST00000141904 Actg2-005 protein_coding Mus_musculus 0 351
ENSMUST00000165629 Actb-008 retained_intron Mus_musculus 0 322
ENSMUST00000167386 Actb-003 processed_transcript Mus_musculus 0 322
ENSMUST00000156343 Actg1-004 retained_intron Mus_musculus 0 311
ENSMUST00000141406 Actg1-007 retained_intron Mus_musculus 0 311
ENSMUST00000131103 Actg1-002 nonsense_mediated_decay Mus_musculus 0 311
ENSMUST00000152029 Actg2-004 protein_coding Mus_musculus 0 285
ENSMUST00000164765 Actb-005 retained_intron Mus_musculus 0 272
ENSDART00000135318 actb1-006 retained_intron Danio_rerio 0 261
ENSDART00000141407 actb1-002 protein_coding Danio_rerio 0 261
ENSMUST00000144868 Actg1-003 retained_intron Mus_musculus 0 200
ENSMUST00000124933 Actg2-006 processed_transcript Mus_musculus 2e-29 134

Loading