C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: actin, gamma 2, smooth muscle, enteric
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000345517 ACTG2-001 ENSG00000163017 9606 + 2:73892979-73919865 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000345517
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000345517 14.245±0.00 43.359±0.00 3.754±0.00 70.967±63.54 493.384±282.42 1.539±1.24 1.703±1.60 188.868±186.30 4.731±0.00 1.776±0.00 61.265±54.12 107.696±59.94 22.166±21.67

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0005615 IDA extracellular space
GO:0005829 TAS cytosol
GO:0005856 IEA cytoskeleton
GO:0006936 TAS muscle contraction
GO:0070062 IDA extracellular vesicular exosome
GO:0072562 IDA blood microparticle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000075161 Actg2-001 protein_coding Mus_musculus 0 1775
ENSMUST00000121731 Actg2-002 protein_coding Mus_musculus 0 1694
ENSDART00000055136 actc1b-201 protein_coding Danio_rerio 0 1234
ENSMUST00000034453 Acta1-201 protein_coding Mus_musculus 0 1206
ENSMUST00000141904 Actg2-005 protein_coding Mus_musculus 0 1186
ENSDART00000080664 protein_coding Danio_rerio 0 1155
ENSDART00000062370 actc1a-001 protein_coding Danio_rerio 0 1153
ENSMUST00000039631 Acta2-201 protein_coding Mus_musculus 0 1146
ENSMUST00000090269 Actc1-001 protein_coding Mus_musculus 0 1146
ENSDART00000114549 hm:zewp0073-201 protein_coding Danio_rerio 0 1125
ENSDART00000141737 actb2-001 protein_coding Danio_rerio 0 1109
ENSDART00000055194 actb2-007 protein_coding Danio_rerio 0 1109
ENSMUST00000100497 Actb-001 protein_coding Mus_musculus 0 1107
ENSDART00000058629 acta1b-001 protein_coding Danio_rerio 0 1103
ENSDART00000066430 acta2-201 protein_coding Danio_rerio 0 1098
ENSDART00000109883 ACTC1 (2 of 2)-002 protein_coding Danio_rerio 0 1083
ENSDART00000052838 acta1a-001 protein_coding Danio_rerio 0 1066
ENSMUST00000121430 Gm12715-001 processed_pseudogene Mus_musculus 0 1051
ENSMUST00000106215 Actg1-201 protein_coding Mus_musculus 0 1040
ENSMUST00000071555 Actg1-001 protein_coding Mus_musculus 0 1040
ENSDART00000054987 actb1-001 protein_coding Danio_rerio 0 1037
ENSDART00000149990 acta2-001 protein_coding Danio_rerio 0 1013
ENSMUST00000082300 Gm8399-201 pseudogene Mus_musculus 0 979
ENSMUST00000152029 Actg2-004 protein_coding Mus_musculus 0 863
ENSMUST00000078717 Lrrc58-001 protein_coding Mus_musculus 0 845
ENSMUST00000119947 Gm15725-001 transcribed_processed_pseudogene Mus_musculus 0 839
ENSMUST00000120059 Gm5388-001 processed_pseudogene Mus_musculus 0 798
ENSDART00000133319 actb1-005 protein_coding Danio_rerio 0 784
ENSMUST00000171419 Actb-007 protein_coding Mus_musculus 0 765
ENSMUST00000167721 Actb-002 protein_coding Mus_musculus 0 754
ENSMUST00000131103 Actg1-002 nonsense_mediated_decay Mus_musculus 0 704
ENSMUST00000184255 Gm17087-001 translated_processed_pseudogene Mus_musculus 0 684
ENSDART00000134020 actb2-003 processed_transcript Danio_rerio 0 678
ENSMUST00000146697 Gm8464-001 transcribed_processed_pseudogene Mus_musculus 0 671
ENSMUST00000140208 Gm8464-002 processed_transcript Mus_musculus 0 671
ENSMUST00000151942 Gm4750-001 transcribed_processed_pseudogene Mus_musculus 0 671
ENSMUST00000152262 Gm4750-002 processed_transcript Mus_musculus 0 671
ENSMUST00000118518 Gm12003-001 processed_pseudogene Mus_musculus 0 664
ENSDART00000148290 actb2-002 nonsense_mediated_decay Danio_rerio 0 625
ENSMUST00000124933 Actg2-006 processed_transcript Mus_musculus 0 606
ENSDART00000138324 actb1-004 protein_coding Danio_rerio 0 586
ENSMUST00000119420 Gm4918-001 processed_pseudogene Mus_musculus 0 503
ENSDART00000148067 actb1-003 processed_transcript Danio_rerio 0 490
ENSMUST00000099636 Actg-ps1-201 processed_pseudogene Mus_musculus 0 398
ENSDART00000141407 actb1-002 protein_coding Danio_rerio 0 390
ENSMUST00000167386 Actb-003 processed_transcript Mus_musculus 0 361
ENSMUST00000062147 Actg1-006 protein_coding Mus_musculus 0 353
ENSDART00000135318 actb1-006 retained_intron Danio_rerio 0 324
ENSMUST00000089616 Actg1-009 protein_coding Mus_musculus 0 244
ENSMUST00000119490 Gm14375-001 processed_pseudogene Mus_musculus 0 228
ENSMUST00000177750 Gm15252-001 processed_pseudogene Mus_musculus 3.9937e-43 180
ENSMUST00000178547 Gm14361-001 processed_pseudogene Mus_musculus 3.9937e-43 180
ENSMUST00000147295 Gm7023-001 processed_pseudogene Mus_musculus 3.9937e-43 180
ENSMUST00000179402 Gm15260-001 processed_pseudogene Mus_musculus 3.9937e-43 180
ENSMUST00000177680 Gm15257-001 processed_pseudogene Mus_musculus 3.9937e-43 180
ENSMUST00000177947 Gm15251-001 processed_pseudogene Mus_musculus 3.9937e-43 180
ENSMUST00000122200 Gm14353-001 processed_pseudogene Mus_musculus 6.00036e-42 176
ENSMUST00000142302 Gm15273-001 processed_pseudogene Mus_musculus 1.99993e-41 174
ENSMUST00000178352 Gm14357-001 processed_pseudogene Mus_musculus 1.99993e-41 174
ENSMUST00000177793 Gm15256-001 processed_pseudogene Mus_musculus 8.99999e-40 169
ENSMUST00000122460 Gm14370-001 processed_pseudogene Mus_musculus 4e-38 163
ENSMUST00000179183 Gm14348-001 processed_pseudogene Mus_musculus 2e-36 158
ENSMUST00000060062 Actrt2-001 protein_coding Mus_musculus 0.00000001 66

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