C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000502306 CTD-2313D3.1-001 ENSG00000248699 9606 + 5:15450701-15451811 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeColonHeartMuscleENST00000502306
Transcript ID Adipose Colon Heart Muscle
ENST00000502306 0.016±0.00 0.018±0.00 0.016±0.00 0.015±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000100497 Actb-001 protein_coding Mus_musculus 0 813
ENSMUST00000071555 Actg1-001 protein_coding Mus_musculus 0 811
ENSMUST00000121430 Gm12715-001 processed_pseudogene Mus_musculus 0 808
ENSMUST00000106215 Actg1-201 protein_coding Mus_musculus 0 808
ENSMUST00000082300 Gm8399-201 pseudogene Mus_musculus 0 758
ENSDART00000054987 actb1-001 protein_coding Danio_rerio 0 691
ENSDART00000141737 actb2-001 protein_coding Danio_rerio 0 680
ENSDART00000055194 actb2-007 protein_coding Danio_rerio 0 680
ENSMUST00000119947 Gm15725-001 transcribed_processed_pseudogene Mus_musculus 0 634
ENSMUST00000078717 Lrrc58-001 protein_coding Mus_musculus 0 634
ENSMUST00000120059 Gm5388-001 processed_pseudogene Mus_musculus 0 606
ENSMUST00000034453 Acta1-201 protein_coding Mus_musculus 0 604
ENSDART00000055136 actc1b-201 protein_coding Danio_rerio 0 595
ENSMUST00000167721 Actb-002 protein_coding Mus_musculus 0 588
ENSDART00000133319 actb1-005 protein_coding Danio_rerio 0 569
ENSDART00000058629 acta1b-001 protein_coding Danio_rerio 0 568
ENSMUST00000171419 Actb-007 protein_coding Mus_musculus 0 555
ENSDART00000052838 acta1a-001 protein_coding Danio_rerio 0 536
ENSDART00000080664 protein_coding Danio_rerio 0 514
ENSMUST00000131103 Actg1-002 nonsense_mediated_decay Mus_musculus 0 510
ENSDART00000062370 actc1a-001 protein_coding Danio_rerio 0 508
ENSMUST00000146697 Gm8464-001 transcribed_processed_pseudogene Mus_musculus 0 507
ENSMUST00000140208 Gm8464-002 processed_transcript Mus_musculus 0 507
ENSMUST00000151942 Gm4750-001 transcribed_processed_pseudogene Mus_musculus 0 507
ENSMUST00000152262 Gm4750-002 processed_transcript Mus_musculus 0 507
ENSMUST00000118518 Gm12003-001 processed_pseudogene Mus_musculus 0 505
ENSDART00000114549 hm:zewp0073-201 protein_coding Danio_rerio 0 492
ENSMUST00000128055 Actg1-005 protein_coding Mus_musculus 0 457
ENSDART00000134020 actb2-003 processed_transcript Danio_rerio 0 425
ENSDART00000148290 actb2-002 nonsense_mediated_decay Danio_rerio 0 394
ENSDART00000138324 actb1-004 protein_coding Danio_rerio 0 379
ENSDART00000109883 ACTC1 (2 of 2)-002 protein_coding Danio_rerio 0 364
ENSDART00000132497 actb2-006 retained_intron Danio_rerio 0 359
ENSMUST00000106216 Actb-006 protein_coding Mus_musculus 0 324
ENSMUST00000167386 Actb-003 processed_transcript Mus_musculus 0 302
ENSMUST00000099636 Actg-ps1-201 processed_pseudogene Mus_musculus 0 291
ENSMUST00000156343 Actg1-004 retained_intron Mus_musculus 0 281
ENSMUST00000141406 Actg1-007 retained_intron Mus_musculus 0 276
ENSMUST00000062147 Actg1-006 protein_coding Mus_musculus 0 259
ENSMUST00000165629 Actb-008 retained_intron Mus_musculus 0 233
ENSMUST00000164765 Actb-005 retained_intron Mus_musculus 0 217
ENSDART00000135318 actb1-006 retained_intron Danio_rerio 0 198
ENSDART00000141407 actb1-002 protein_coding Danio_rerio 0 198
ENSMUST00000149888 Gm14747-001 processed_pseudogene Mus_musculus 1.4013e-45 187
ENSDART00000134924 actb2-004 retained_intron Danio_rerio 8.96831e-44 182
ENSDART00000135971 actb2-005 retained_intron Danio_rerio 8.96831e-44 182
ENSMUST00000144868 Actg1-003 retained_intron Mus_musculus 3e-38 163
ENSMUST00000163829 Actb-004 protein_coding Mus_musculus 2e-35 154

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