C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 11185
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117732 Gm11185-001 ENSMUSG00000083245 10090 + 4:83193988-83194994 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000117732
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000117732 0.258±0.15 0.096±0.02 0.121±0.00 0.066±0.05 0.708±0.63 0.137±0.05 0.203±0.07 0.129±0.09 0.065±0.05 0.036±0.00 0.444±0.28 0.174±0.10 0.070±0.03 0.047±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000943 CIL_000943_0002 VISTA 4:82615373-83218271
CIL_00014A CIL_00014A_0002 CGP 4:82897920-83324255

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000058384 gapdhs-001 protein_coding Danio_rerio 0 407
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 1147
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 898
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 1127
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 1147
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 1147
ENST00000402643 GAPDHP72-001 processed_pseudogene Homo_sapiens 0 883
ENST00000403475 RP11-378G13.2-001 processed_pseudogene Homo_sapiens 0 841
ENST00000405405 GAPDHP63-001 processed_pseudogene Homo_sapiens 0 974
ENST00000419696 GAPDHP64-001 processed_pseudogene Homo_sapiens 0 822
ENST00000422905 GAPDHP67-001 processed_pseudogene Homo_sapiens 0 296
ENST00000423136 GAPDHP55-001 processed_pseudogene Homo_sapiens 0 586
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 854
ENST00000424043 GAPDHP46-001 processed_pseudogene Homo_sapiens 0 808
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 1038
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 904
ENST00000426454 GAPDHP51-001 processed_pseudogene Homo_sapiens 0 695
ENST00000429913 GAPDHP29-001 processed_pseudogene Homo_sapiens 0 612
ENST00000432206 GAPDHP2-001 processed_pseudogene Homo_sapiens 0 854
ENST00000434621 GAPDHP68-001 processed_pseudogene Homo_sapiens 0 880
ENST00000436626 GAPDHP48-001 processed_pseudogene Homo_sapiens 0 551
ENST00000436818 GAPDHP26-001 processed_pseudogene Homo_sapiens 0 667
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 791
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 0 617
ENST00000444107 GAPDHP20-001 processed_pseudogene Homo_sapiens 0 667
ENST00000444823 GAPDHP23-001 processed_pseudogene Homo_sapiens 0 621
ENST00000445880 RP1-52D1.1-001 processed_pseudogene Homo_sapiens 2e-35 150
ENST00000447427 GAPDHP27-001 processed_pseudogene Homo_sapiens 0 555
ENST00000450301 GAPDHP21-001 processed_pseudogene Homo_sapiens 0 806
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 1090
ENST00000455134 GAPDHP28-001 processed_pseudogene Homo_sapiens 0 798
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 590
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 898
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 898
ENST00000481866 GAPDHP39-001 processed_pseudogene Homo_sapiens 0 575
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 804
ENST00000503632 GAPDHP38-001 processed_pseudogene Homo_sapiens 0 852
ENST00000505218 GAPDHP40-001 processed_pseudogene Homo_sapiens 0 846
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 924
ENST00000509325 GAPDHP31-001 processed_pseudogene Homo_sapiens 0 638
ENST00000512110 AC007016.3-001 processed_pseudogene Homo_sapiens 0 267
ENST00000512278 GAPDHP76-001 unprocessed_pseudogene Homo_sapiens 0 281
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 872
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 0 929
ENST00000513953 RP11-44N17.1-001 processed_pseudogene Homo_sapiens 0 628
ENST00000515313 GAPDHP62-001 processed_pseudogene Homo_sapiens 0 821
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 0 562
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 1040

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