C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 12416
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120911 Gm12416-001 ENSMUSG00000083044 10090 + 4:84104895-84105902 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000120911
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000120911 0.124±0.10 0.195±0.08 0.091±0.01 0.231±0.19 0.368±0.13 0.227±0.04 0.223±0.12 0.258±0.09 0.212±0.38 0.116±0.11 0.355±0.06 0.135±0.09 0.101±0.08 0.031±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007PP CIL_0007PP_0002 UCNEbase 4:83661885-85119123

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000058384 gapdhs-001 protein_coding Danio_rerio 0 401
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 1182
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 1068
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 1162
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 1182
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 1182
ENST00000398586 GAPDHP15-001 processed_pseudogene Homo_sapiens 0 558
ENST00000402643 GAPDHP72-001 processed_pseudogene Homo_sapiens 0 935
ENST00000403475 RP11-378G13.2-001 processed_pseudogene Homo_sapiens 0 893
ENST00000405405 GAPDHP63-001 processed_pseudogene Homo_sapiens 0 985
ENST00000419696 GAPDHP64-001 processed_pseudogene Homo_sapiens 0 852
ENST00000423136 GAPDHP55-001 processed_pseudogene Homo_sapiens 0 571
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 876
ENST00000424043 GAPDHP46-001 processed_pseudogene Homo_sapiens 0 808
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 1072
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 917
ENST00000429913 GAPDHP29-001 processed_pseudogene Homo_sapiens 0 636
ENST00000432206 GAPDHP2-001 processed_pseudogene Homo_sapiens 0 870
ENST00000434621 GAPDHP68-001 processed_pseudogene Homo_sapiens 0 939
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 800
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 0 667
ENST00000444823 GAPDHP23-001 processed_pseudogene Homo_sapiens 0 634
ENST00000445880 RP1-52D1.1-001 processed_pseudogene Homo_sapiens 9e-34 145
ENST00000447427 GAPDHP27-001 processed_pseudogene Homo_sapiens 0 540
ENST00000450301 GAPDHP21-001 processed_pseudogene Homo_sapiens 0 819
ENST00000450472 GAPDHP14-001 processed_pseudogene Homo_sapiens 0 459
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 1123
ENST00000455134 GAPDHP28-001 processed_pseudogene Homo_sapiens 0 813
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 617
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 917
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 917
ENST00000481866 GAPDHP39-001 processed_pseudogene Homo_sapiens 0 603
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 819
ENST00000503632 GAPDHP38-001 processed_pseudogene Homo_sapiens 0 881
ENST00000505218 GAPDHP40-001 processed_pseudogene Homo_sapiens 0 870
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 963
ENST00000509325 GAPDHP31-001 processed_pseudogene Homo_sapiens 0 651
ENST00000512110 AC007016.3-001 processed_pseudogene Homo_sapiens 0 294
ENST00000513369 RP11-159J3.1-001 processed_pseudogene Homo_sapiens 0 896
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 920
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 0 941
ENST00000515281 GAPDHP70-001 processed_pseudogene Homo_sapiens 0 739
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 0 584
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 1053

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