C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 14473
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000122269 Gm14473-001 ENSMUSG00000081680 10090 - X:10865077-10865633 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderLungOvaryPlacentaENSMUST00000122269
Transcript ID Bladder Lung Ovary Placenta
ENSMUST00000122269 0.017±0.00 0.146±0.00 0.540±0.00 0.267±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000255320 HMGB1P5-001 transcribed_processed_pseudogene Homo_sapiens 0 640
ENST00000326004 HMGB1-003 protein_coding Homo_sapiens 0 531
ENST00000339872 HMGB1-001 protein_coding Homo_sapiens 0 645
ENST00000341423 HMGB1-004 protein_coding Homo_sapiens 0 645
ENST00000395823 HMGB1P10-001 processed_pseudogene Homo_sapiens 0 579
ENST00000399489 HMGB1-009 protein_coding Homo_sapiens 0 531
ENST00000399494 HMGB1-011 protein_coding Homo_sapiens 0 645
ENST00000402555 HMGB1P20-001 processed_pseudogene Homo_sapiens 0 435
ENST00000405805 HMGB1-012 protein_coding Homo_sapiens 0 645
ENST00000406019 HMGB1P13-001 processed_pseudogene Homo_sapiens 0 416
ENST00000413899 HMGB1P11-001 processed_pseudogene Homo_sapiens 0 516
ENST00000429856 HMGB1P9-001 processed_pseudogene Homo_sapiens 0 529
ENST00000437242 HMGB1P31-001 processed_pseudogene Homo_sapiens 0 311
ENST00000451497 HMGB1P5-002 processed_transcript Homo_sapiens 0 479
ENST00000468384 HMGB1-007 processed_transcript Homo_sapiens 0 200
ENST00000487709 HMGB1P36-001 processed_pseudogene Homo_sapiens 0 268
ENST00000522557 HMGB1P1-001 processed_pseudogene Homo_sapiens 0 584
ENST00000615653 RP11-19G24.3-001 transcribed_processed_pseudogene Homo_sapiens 0 545

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