Transcript ID | Lung |
---|---|
ENST00000487709 | 0.297±0.00 |
Transcript Info |
||||||
Description: | high mobility group box 1 pseudogene 36 | |||||
---|---|---|---|---|---|---|
Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000487709 | HMGB1P36-001 | ENSG00000243873 | 9606 | + | 3:70753854-70754573 | processed_pseudogene |
Expression Patterns
|
Conserved Regions | |||
---|---|---|---|
Region ID | Sub-Region | Region Type | Position |
CIL_0007L4 | CIL_0007L4_0001 | UCNEbase | 3:70042617-71525233 |
CIL_0009A6 | CIL_0009A6_0001 | VISTA | 3:70216091-70817701 |
CIL_00094D | CIL_00094D_0001 | VISTA | 3:70352338-70953753 |
CIL_0009A7 | CIL_0009A7_0001 | VISTA | 3:70522165-71123806 |
CIL_0008N6 | CIL_0008N6_0001 | VISTA | 3:70677078-71277613 |
CIL_00096K | CIL_00096K_0001 | VISTA | 3:70685238-71286279 |
CIL_0007PZ | CIL_0007PZ_0001 | VISTA | 3:70703225-71304095 |
CIL_0008OZ | CIL_0008OZ_0001 | VISTA | 3:70750006-71351700 |
Gene Ontology | ||
---|---|---|
GO ID | Evidence Type | GO Description |
No GO terms available. |
Homologs | |||||
ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
ENSMUST00000120421 | Gm15387-001 | processed_pseudogene | Mus_musculus | 0 | 399 |
ENSMUST00000178049 | Gm21596-201 | processed_pseudogene | Mus_musculus | 0 | 399 |
ENSMUST00000093196 | Hmgb1-002 | protein_coding | Mus_musculus | 0 | 394 |
ENSMUST00000110505 | Hmgb1-003 | protein_coding | Mus_musculus | 0 | 394 |
ENSMUST00000085546 | Hmgb1-001 | protein_coding | Mus_musculus | 0 | 394 |
ENSMUST00000119503 | Hmgb1-ps6-001 | processed_pseudogene | Mus_musculus | 0 | 390 |
ENSMUST00000118415 | Hmgb1-ps3-001 | processed_pseudogene | Mus_musculus | 0 | 388 |
ENSMUST00000084171 | Gm5518-201 | processed_pseudogene | Mus_musculus | 0 | 388 |
ENSMUST00000118281 | Hmgb1-ps4-001 | processed_pseudogene | Mus_musculus | 0 | 383 |
ENSMUST00000119715 | Gm5937-001 | processed_pseudogene | Mus_musculus | 0 | 381 |
ENSMUST00000179479 | Hmgb1-ps9-201 | processed_pseudogene | Mus_musculus | 0 | 377 |
ENSMUST00000179821 | RP24-388H6.4-001 | processed_pseudogene | Mus_musculus | 0 | 375 |
ENSMUST00000119927 | Gm12331-001 | processed_pseudogene | Mus_musculus | 0 | 363 |
ENSMUST00000121058 | Hmgb1-ps5-001 | processed_pseudogene | Mus_musculus | 0 | 357 |
ENSMUST00000181542 | Hmgb1-ps8-001 | processed_pseudogene | Mus_musculus | 0 | 340 |
ENSMUST00000162030 | AC098736.2-001 | processed_pseudogene | Mus_musculus | 0 | 337 |
ENSMUST00000117362 | Gm12568-001 | processed_pseudogene | Mus_musculus | 0 | 327 |
ENSMUST00000179326 | Gm5473-201 | processed_pseudogene | Mus_musculus | 0 | 320 |
ENSMUST00000139443 | Hmgb1-006 | retained_intron | Mus_musculus | 0 | 313 |
ENSMUST00000119126 | Gm9078-001 | processed_pseudogene | Mus_musculus | 0 | 305 |
ENSMUST00000183926 | Gm27254-001 | processed_pseudogene | Mus_musculus | 0 | 302 |
ENSMUST00000121009 | Gm14049-001 | processed_pseudogene | Mus_musculus | 0 | 302 |
ENSMUST00000118053 | Gm13379-001 | processed_pseudogene | Mus_musculus | 0 | 298 |
ENSMUST00000120175 | Gm11830-001 | processed_pseudogene | Mus_musculus | 0 | 291 |
ENSMUST00000121222 | Gm5396-001 | processed_pseudogene | Mus_musculus | 0 | 285 |
ENSMUST00000117107 | Gm15560-001 | processed_pseudogene | Mus_musculus | 0 | 281 |
ENSMUST00000119766 | Gm12118-001 | processed_pseudogene | Mus_musculus | 0 | 274 |
ENSMUST00000117940 | Hmgb1-rs18-001 | processed_pseudogene | Mus_musculus | 0 | 272 |
ENSMUST00000122269 | Gm14473-001 | processed_pseudogene | Mus_musculus | 0 | 268 |
ENSMUST00000190177 | RP24-229N7.1-001 | processed_pseudogene | Mus_musculus | 0 | 259 |
ENSMUST00000120970 | Gm15750-001 | processed_pseudogene | Mus_musculus | 0 | 237 |
ENSMUST00000117499 | Gm12261-001 | processed_pseudogene | Mus_musculus | 0 | 237 |
ENSMUST00000138553 | Hmgb1-007 | protein_coding | Mus_musculus | 0 | 235 |
ENSMUST00000186576 | RP24-241N3.1-001 | processed_pseudogene | Mus_musculus | 0 | 193 |
ENSMUST00000133667 | Hmgb1-004 | retained_intron | Mus_musculus | 2e-37 | 159 |
ENSMUST00000125605 | Hmgb1-008 | protein_coding | Mus_musculus | 1e-30 | 137 |
ENSMUST00000120168 | Gm13902-001 | processed_pseudogene | Mus_musculus | 6e-28 | 128 |
ENSMUST00000116383 | Gm14448-001 | processed_pseudogene | Mus_musculus | 1e-24 | 117 |