C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 11281
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000141391 Gm11281-001 ENSMUSG00000078917 10090 - 13:21953053-21953628 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000141391
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000141391 0.420±0.25 0.503±0.22 0.252±0.21 1.138±0.05 0.130±0.00 0.241±0.00 0.164±0.00 0.282±0.00 0.059±0.04 0.278±0.09 0.948±0.75 0.387±0.34 0.965±0.43

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00096D CIL_00096D_0002 VISTA 13:21673105-22276611

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000247219 TBPL2-001 protein_coding Homo_sapiens 0 209
ENST00000272274 RPL21-003 protein_coding Homo_sapiens 0 494
ENST00000311549 RPL21-001 protein_coding Homo_sapiens 0 512
ENST00000319826 RPL21-004 protein_coding Homo_sapiens 0 492
ENST00000326092 RPL21-005 protein_coding Homo_sapiens 0 494
ENST00000395517 RPL21P3-001 processed_pseudogene Homo_sapiens 0 411
ENST00000396599 RPL21P75-001 processed_pseudogene Homo_sapiens 0 472
ENST00000397467 RPL21P17-001 processed_pseudogene Homo_sapiens 0 403
ENST00000403842 RP11-203F10.6-001 processed_pseudogene Homo_sapiens 0 440
ENST00000416102 AC017079.4-001 processed_pseudogene Homo_sapiens 0 331
ENST00000416622 RP11-329A14.2-001 processed_pseudogene Homo_sapiens 0 331
ENST00000418441 RP11-151F5.2-001 processed_pseudogene Homo_sapiens 0 438
ENST00000423231 RP11-26H16.1-001 processed_pseudogene Homo_sapiens 0 411
ENST00000426566 RPL21P66-001 processed_pseudogene Homo_sapiens 0 257
ENST00000432935 RP5-1068B5.1-001 processed_pseudogene Homo_sapiens 0.00000004 62
ENST00000433345 RPL21P110-001 processed_pseudogene Homo_sapiens 0 202
ENST00000433493 RP5-859M6.1-001 processed_pseudogene Homo_sapiens 0 230
ENST00000441274 RP11-490K7.1-001 processed_pseudogene Homo_sapiens 0 339
ENST00000443666 RPL21P133-001 processed_pseudogene Homo_sapiens 0 287
ENST00000453468 RPL21P134-001 processed_pseudogene Homo_sapiens 0 433
ENST00000454675 AC092155.1-001 processed_pseudogene Homo_sapiens 0 449
ENST00000459863 RPL21P41-001 processed_pseudogene Homo_sapiens 0 235
ENST00000461690 RPL21-007 nonsense_mediated_decay Homo_sapiens 0 492
ENST00000463605 RPL21P39-001 processed_pseudogene Homo_sapiens 0 438
ENST00000465083 RPL21P8-001 processed_pseudogene Homo_sapiens 4.06377e-44 182
ENST00000465295 RP11-30K9.1-001 processed_pseudogene Homo_sapiens 0 394
ENST00000466550 RPL21-006 retained_intron Homo_sapiens 0 255
ENST00000472093 RP11-267J23.1-001 processed_pseudogene Homo_sapiens 0 281
ENST00000472975 RP11-112N19.2-001 processed_pseudogene Homo_sapiens 0 401
ENST00000477341 RP11-734J24.1-001 processed_pseudogene Homo_sapiens 0 431
ENST00000479171 RPL21P6-001 processed_pseudogene Homo_sapiens 4.06377e-44 182
ENST00000480465 RP11-492M23.2-001 processed_pseudogene Homo_sapiens 0 468
ENST00000482506 RPL21P116-001 processed_pseudogene Homo_sapiens 0 438
ENST00000482905 RPL21P120-001 processed_pseudogene Homo_sapiens 0 383
ENST00000484462 RPL21P119-001 processed_pseudogene Homo_sapiens 0 468
ENST00000485217 CTD-2182N23.1-001 processed_pseudogene Homo_sapiens 0 241
ENST00000485945 RP11-613M5.2-001 processed_pseudogene Homo_sapiens 0 453
ENST00000487382 CTD-2158P22.1-001 processed_pseudogene Homo_sapiens 0 302
ENST00000488289 RP13-585F24.1-001 processed_pseudogene Homo_sapiens 0 444
ENST00000491732 RPL21P129-001 processed_pseudogene Homo_sapiens 0 331
ENST00000493317 RPL21-009 protein_coding Homo_sapiens 0 381
ENST00000493466 RP11-9D8.1-001 processed_pseudogene Homo_sapiens 0 399
ENST00000495531 RP11-572P18.1-001 processed_pseudogene Homo_sapiens 0 477
ENST00000496412 CTD-2290C23.2-001 processed_pseudogene Homo_sapiens 0 370
ENST00000497298 RPL21P131-001 processed_pseudogene Homo_sapiens 0 416
ENST00000600955 RP1-228H13.1-001 processed_pseudogene Homo_sapiens 0 414

Loading