C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L21
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000493317 RPL21-009 ENSG00000122026 9606 + 13:27253705-27256307 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000GA CIL_0000GA_0002 CGP 13:27066142-27256691
CIL_0004MI CIL_0004MI_0001 CGP 13:27251309-27273690

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005622 IEA intracellular
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0005840 IEA ribosome
GO:0006412 IEA translation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000035983 Rpl21-001 protein_coding Mus_musculus 0 497
ENSMUST00000099272 Rpl21-003 protein_coding Mus_musculus 0 496
ENSMUST00000075453 Rpl21-002 protein_coding Mus_musculus 0 496
ENSMUST00000160079 Gm3355-001 processed_pseudogene Mus_musculus 0 477
ENSMUST00000121545 Rpl21-ps15-001 processed_pseudogene Mus_musculus 0 470
ENSMUST00000119328 Gm14648-001 processed_pseudogene Mus_musculus 0 470
ENSMUST00000155008 Gm10163-001 processed_pseudogene Mus_musculus 0 470
ENSMUST00000076314 Gm5528-001 processed_pseudogene Mus_musculus 0 470
ENSMUST00000121309 Gm13370-001 processed_pseudogene Mus_musculus 0 470
ENSMUST00000089785 Gm10240-001 processed_pseudogene Mus_musculus 0 470
ENSMUST00000118352 Gm11703-001 processed_pseudogene Mus_musculus 0 470
ENSMUST00000119140 Gm12411-001 processed_pseudogene Mus_musculus 0 459
ENSMUST00000093411 Gm8054-201 processed_pseudogene Mus_musculus 0 459
ENSMUST00000084598 Gm10155-201 processed_pseudogene Mus_musculus 0 459
ENSMUST00000071237 Rpl21-ps10-201 processed_pseudogene Mus_musculus 0 459
ENSMUST00000130005 Rpl21-ps8-001 processed_pseudogene Mus_musculus 0 453
ENSMUST00000178657 Gm10045-001 processed_pseudogene Mus_musculus 0 453
ENSMUST00000080330 Gm10916-201 processed_pseudogene Mus_musculus 0 453
ENSMUST00000121800 Gm8880-001 processed_pseudogene Mus_musculus 0 451
ENSMUST00000119897 Rpl21-ps9-001 processed_pseudogene Mus_musculus 0 449
ENSMUST00000180049 Gm6919-001 processed_pseudogene Mus_musculus 0 449
ENSMUST00000121563 Gm15682-001 processed_pseudogene Mus_musculus 0 448
ENSMUST00000122260 Gm13653-001 processed_pseudogene Mus_musculus 0 448
ENSMUST00000080223 Rpl21-ps3-201 processed_pseudogene Mus_musculus 0 448
ENSMUST00000080279 Rpl21-ps14-201 processed_pseudogene Mus_musculus 0 448
ENSMUST00000119332 Gm13604-001 processed_pseudogene Mus_musculus 0 446
ENSMUST00000095268 Gm9104-001 processed_pseudogene Mus_musculus 0 436
ENSMUST00000077420 Rpl21-ps7-201 processed_pseudogene Mus_musculus 0 436
ENSMUST00000072532 Rpl21-ps13-201 processed_pseudogene Mus_musculus 0 436
ENSMUST00000119542 Gm15921-001 processed_pseudogene Mus_musculus 0 436
ENSMUST00000074828 Rpl21-ps6-001 processed_pseudogene Mus_musculus 0 433
ENSMUST00000117993 Gm13641-001 processed_pseudogene Mus_musculus 0 433
ENSMUST00000153140 Gm16060-001 processed_pseudogene Mus_musculus 0 431
ENSMUST00000179660 Gm16416-201 processed_pseudogene Mus_musculus 0 431
ENSMUST00000081668 Rpl21-ps12-201 processed_pseudogene Mus_musculus 0 431
ENSMUST00000119242 Gm14115-001 processed_pseudogene Mus_musculus 0 425
ENSMUST00000095940 Rpl21-ps5-201 processed_pseudogene Mus_musculus 0 425
ENSMUST00000117861 Gm12760-001 processed_pseudogene Mus_musculus 0 424
ENSMUST00000130905 Gm6689-001 processed_pseudogene Mus_musculus 0 416
ENSMUST00000120348 Gm12123-001 processed_pseudogene Mus_musculus 0 416
ENSMUST00000080097 Gm16415-001 processed_pseudogene Mus_musculus 0 414
ENSMUST00000118772 Gm11975-001 processed_pseudogene Mus_musculus 0 412
ENSMUST00000122454 Gm8840-001 processed_pseudogene Mus_musculus 0 412
ENSMUST00000077278 Rpl21-ps11-201 processed_pseudogene Mus_musculus 0 409
ENSMUST00000117491 Gm14336-001 processed_pseudogene Mus_musculus 0 407
ENSMUST00000121754 Gm12618-001 processed_pseudogene Mus_musculus 0 403
ENSMUST00000120607 Gm13525-001 processed_pseudogene Mus_musculus 0 398
ENSMUST00000080237 Rpl21-ps4-201 protein_coding Mus_musculus 0 398
ENSMUST00000117320 Gm15578-001 unprocessed_pseudogene Mus_musculus 0 392
ENSMUST00000079153 Gm8526-201 processed_pseudogene Mus_musculus 0 390
ENSMUST00000141391 Gm11281-001 processed_pseudogene Mus_musculus 0 381
ENSMUST00000120315 Gm9378-001 processed_pseudogene Mus_musculus 0 366
ENSMUST00000080061 Gm8724-201 processed_pseudogene Mus_musculus 0 331
ENSMUST00000119262 Gm12944-001 processed_pseudogene Mus_musculus 0 313
ENSMUST00000118827 Gm15312-001 processed_pseudogene Mus_musculus 0 298
ENSMUST00000117461 Gm14657-001 processed_pseudogene Mus_musculus 0 292
ENSMUST00000121644 Gm15309-001 processed_pseudogene Mus_musculus 0 281
ENSMUST00000119382 Gm14106-001 processed_pseudogene Mus_musculus 0 263
ENSMUST00000034094 Gins3-201 protein_coding Mus_musculus 0 252
ENSDART00000002595 rpl21-001 protein_coding Danio_rerio 0 244
ENSMUST00000185232 RP23-478I8.1-001 processed_pseudogene Mus_musculus 0 239
ENSMUST00000120018 Gm13518-001 processed_pseudogene Mus_musculus 0 219
ENSMUST00000151871 Rpl21-005 retained_intron Mus_musculus 0 219
ENSMUST00000120458 Gm7071-001 processed_pseudogene Mus_musculus 0 204
ENSMUST00000119221 Gm12934-001 processed_pseudogene Mus_musculus 8.40779e-45 183
ENSMUST00000170118 Gm17113-001 processed_pseudogene Mus_musculus 9e-35 150
ENSMUST00000154768 Rpl21-004 retained_intron Mus_musculus 3e-29 132

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