C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene, 27018
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000181136 Gm27018-001 ENSMUSG00000097175 10090 - 6:6329998-6330222 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainHeartOvaryPlacentaENSMUST00000181136
Transcript ID Bladder Brain Heart Ovary Placenta
ENSMUST00000181136 0.217±0.00 0.631±0.00 0.888±0.00 1.245±0.00 8.835±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007W8 CIL_0007W8_0002 VISTA 6:5861772-6464755
CIL_00097Z CIL_00097Z_0002 VISTA 6:6016533-6617120
CIL_00078J CIL_00078J_0002 CGP 6:6041218-6578658
CIL_000980 CIL_000980_0002 VISTA 6:6063941-6664446
CIL_000981 CIL_000981_0002 VISTA 6:6158809-6759381

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000272317 RPS27A-001 protein_coding Homo_sapiens 0 311
ENST00000329806 RP11-558O12.1-001 processed_pseudogene Homo_sapiens 0 248
ENST00000402285 RPS27A-003 protein_coding Homo_sapiens 0 311
ENST00000402798 RP11-367G18.2-001 processed_pseudogene Homo_sapiens 0 272
ENST00000404735 RPS27A-002 protein_coding Homo_sapiens 0 311
ENST00000422792 AC079807.3-001 processed_pseudogene Homo_sapiens 0 233
ENST00000429552 RP4-814D15.2-001 processed_pseudogene Homo_sapiens 0 254
ENST00000434254 AC008072.1-001 processed_pseudogene Homo_sapiens 7e-34 148
ENST00000443181 MIR4426-001 processed_pseudogene Homo_sapiens 0 289
ENST00000449323 RPS27A-004 protein_coding Homo_sapiens 0 311
ENST00000453803 RPS27AP3-001 processed_pseudogene Homo_sapiens 0 224
ENST00000468810 RPS27A-010 retained_intron Homo_sapiens 0 211
ENST00000471772 RPS27A-009 retained_intron Homo_sapiens 9e-36 154
ENST00000475545 RPS27AP1-001 processed_pseudogene Homo_sapiens 0 244
ENST00000478196 RPS27A-008 retained_intron Homo_sapiens 0 311
ENST00000492222 RP11-51O6.1-001 transcribed_processed_pseudogene Homo_sapiens 0 302
ENST00000494756 RPS27A-012 retained_intron Homo_sapiens 9e-36 154
ENST00000495843 RPS27A-005 retained_intron Homo_sapiens 0 268
ENST00000515536 RP11-166J22.1-001 processed_pseudogene Homo_sapiens 0 189
ENST00000591758 RP11-51O6.1-002 processed_transcript Homo_sapiens 0 302
ENST00000611893 RPS27A-201 protein_coding Homo_sapiens 0 268

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