C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glyceraldehyde-3-phosphate dehydrogenase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000183272 Gapdh-017 ENSMUSG00000057666 10090 - 6:125162064-125165576 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000183272
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000183272 156.233±29.57 360.602±86.20 150.261±0.00 159.695±13.79 284.301±110.69 249.246±46.37 292.210±28.62 353.474±85.90 77.250±10.48 877.495±152.49 279.821±48.27 253.151±55.13 24.740±5.23

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004365 IEA glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
GO:0006006 IEA glucose metabolic process
GO:0006096 IEA glycolytic process
GO:0050661 IEA NADP binding
GO:0051287 IEA NAD binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000058384 gapdhs-001 protein_coding Danio_rerio 0 436
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 1044
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 935
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 1044
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 1044
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 1044
ENST00000398586 GAPDHP15-001 processed_pseudogene Homo_sapiens 0 481
ENST00000402643 GAPDHP72-001 processed_pseudogene Homo_sapiens 0 865
ENST00000403475 RP11-378G13.2-001 processed_pseudogene Homo_sapiens 0 822
ENST00000405405 GAPDHP63-001 processed_pseudogene Homo_sapiens 0 891
ENST00000419696 GAPDHP64-001 processed_pseudogene Homo_sapiens 0 776
ENST00000423136 GAPDHP55-001 processed_pseudogene Homo_sapiens 0 555
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 763
ENST00000424043 GAPDHP46-001 processed_pseudogene Homo_sapiens 0 750
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 942
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 821
ENST00000429913 GAPDHP29-001 processed_pseudogene Homo_sapiens 0 676
ENST00000432206 GAPDHP2-001 processed_pseudogene Homo_sapiens 0 793
ENST00000436626 GAPDHP48-001 processed_pseudogene Homo_sapiens 0 536
ENST00000436818 GAPDHP26-001 processed_pseudogene Homo_sapiens 0 691
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 732
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 0 608
ENST00000444107 GAPDHP20-001 processed_pseudogene Homo_sapiens 0 621
ENST00000444823 GAPDHP23-001 processed_pseudogene Homo_sapiens 0 577
ENST00000445880 RP1-52D1.1-001 processed_pseudogene Homo_sapiens 2e-19 97
ENST00000447427 GAPDHP27-001 processed_pseudogene Homo_sapiens 0 449
ENST00000450301 GAPDHP21-001 processed_pseudogene Homo_sapiens 0 754
ENST00000450472 GAPDHP14-001 processed_pseudogene Homo_sapiens 0 484
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 985
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 592
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 935
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 935
ENST00000481866 GAPDHP39-001 processed_pseudogene Homo_sapiens 0 556
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 747
ENST00000503632 GAPDHP38-001 processed_pseudogene Homo_sapiens 0 782
ENST00000505218 GAPDHP40-001 processed_pseudogene Homo_sapiens 0 785
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 857
ENST00000509325 GAPDHP31-001 processed_pseudogene Homo_sapiens 0 606
ENST00000512110 AC007016.3-001 processed_pseudogene Homo_sapiens 0 257
ENST00000513369 RP11-159J3.1-001 processed_pseudogene Homo_sapiens 0 809
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 846
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 0 848
ENST00000513953 RP11-44N17.1-001 processed_pseudogene Homo_sapiens 0 538
ENST00000515313 GAPDHP62-001 processed_pseudogene Homo_sapiens 0 793
ENST00000520713 ANKRD46-009 processed_transcript Homo_sapiens 0 793
ENST00000524319 ANKRD46-003 processed_transcript Homo_sapiens 0 793
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 0 510
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 1044

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