C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: H3 histone, family 3A pseudogene 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000497682 H3F3AP3-001 ENSG00000230618 9606 - 3:109409678-109410084 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonLiverLungMuscleOvaryENST00000497682
Transcript ID Colon Liver Lung Muscle Ovary
ENST00000497682 0.092±0.00 0.043±0.00 0.047±0.00 0.124±0.00 0.095±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000162814 H3f3a-003 protein_coding Mus_musculus 0 562
ENSMUST00000161308 H3f3a-001 protein_coding Mus_musculus 0 562
ENSMUST00000119544 H3f3a-ps2-001 processed_pseudogene Mus_musculus 0 556
ENSMUST00000119459 H3f3c-001 processed_pseudogene Mus_musculus 0 551
ENSMUST00000179671 Gm10257-201 processed_pseudogene Mus_musculus 0 551
ENSMUST00000119546 H3f3a-ps1-001 processed_pseudogene Mus_musculus 0 544
ENSMUST00000081026 H3f3a-006 protein_coding Mus_musculus 0 542
ENSMUST00000119560 Gm12657-001 processed_pseudogene Mus_musculus 0 540
ENSMUST00000121118 Gm13529-001 processed_pseudogene Mus_musculus 0 516
ENSMUST00000171334 Gm4938-201 processed_pseudogene Mus_musculus 0 501
ENSMUST00000179566 Gm6132-201 processed_pseudogene Mus_musculus 0 490
ENSMUST00000159789 H3f3a-007 protein_coding Mus_musculus 0 488
ENSMUST00000169993 Gm17136-001 processed_pseudogene Mus_musculus 0 468
ENSMUST00000121683 Gm12950-001 processed_pseudogene Mus_musculus 0 468
ENSMUST00000183321 Gm26980-001 processed_pseudogene Mus_musculus 0 462
ENSMUST00000120136 Gm15763-001 processed_pseudogene Mus_musculus 0 457
ENSMUST00000121719 Gm12271-001 processed_pseudogene Mus_musculus 0 440
ENSMUST00000179046 Gm7426-201 pseudogene Mus_musculus 0 440
ENSMUST00000117894 Gm14529-001 processed_pseudogene Mus_musculus 0 424
ENSMUST00000159441 H3f3a-005 retained_intron Mus_musculus 0 387
ENSMUST00000186232 RP23-128A11.4-001 processed_pseudogene Mus_musculus 0 383
ENSMUST00000118436 Gm13349-001 processed_pseudogene Mus_musculus 0 379
ENSMUST00000120730 Gm15220-001 processed_pseudogene Mus_musculus 0 370
ENSMUST00000162118 H3f3a-002 protein_coding Mus_musculus 0 220
ENSMUST00000159685 H3f3a-004 protein_coding Mus_musculus 0 211

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