C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000331817 KRT7-001 ENSG00000135480 9606 + 12:52233114-52248921 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000331817
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000331817 1.069±0.00 0.305±0.00 2.949±0.00 0.050±0.00 40.395±38.43 0.502±0.19 0.222±0.07 56.938±55.78 4.277±0.00 137.012±128.57 0.157±0.00 25.079±23.07 681.743±191.77 5.042±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006TB CIL_0006TB_0001 CGP 12:52168996-52252186
CIL_00033Q CIL_00033Q_0004 CGP 12:52232520-52309163

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005882 NAS:IEA intermediate filament
GO:0016032 IEA viral process
GO:0045095 IEA keratin filament
GO:0046417 IEA chorismate metabolic process
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000068904 Krt7-001 protein_coding Mus_musculus 0 1343
ENSMUST00000131069 Krt7-002 retained_intron Mus_musculus 0 817
ENSMUST00000023714 4732456N10Rik-001 protein_coding Mus_musculus 0 678
ENSMUST00000023709 Krt5-001 protein_coding Mus_musculus 0 665
ENSMUST00000023788 Krt6a-201 protein_coding Mus_musculus 0 588
ENSMUST00000023786 Krt6b-201 protein_coding Mus_musculus 0 566
ENSMUST00000063292 Krt73-001 protein_coding Mus_musculus 0 536
ENSMUST00000147662 Krt7-003 protein_coding Mus_musculus 0 518
ENSMUST00000100179 Krt76-001 protein_coding Mus_musculus 0 453
ENSMUST00000023799 Krt79-001 protein_coding Mus_musculus 0 422
ENSMUST00000087996 Krt77-001 protein_coding Mus_musculus 0 250
ENSMUST00000100184 Gm5478-201 protein_coding Mus_musculus 0 239
ENSMUST00000088049 Krt86-201 protein_coding Mus_musculus 0 202
ENSMUST00000061185 Krt81-201 protein_coding Mus_musculus 0 195
ENSMUST00000081945 Krt83-201 protein_coding Mus_musculus 2e-27 128
ENSMUST00000023718 5430421N21Rik-001 protein_coding Mus_musculus 9e-26 122
ENSMUST00000023790 Krt1-201 protein_coding Mus_musculus 7e-22 110
ENSMUST00000179022 Lmnb2-201 protein_coding Mus_musculus 0.0000000000005 81
ENSMUST00000105332 Lmnb2-002 protein_coding Mus_musculus 0.0000000000005 81
ENSMUST00000057623 Lmnb2-001 protein_coding Mus_musculus 0.0000000000005 81

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