C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: predicted gene 13688
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121557 Gm13688-001 ENSMUSG00000083284 10090 + 2:80602733-80603340 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000121557
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000121557 0.289±0.12 0.552±0.56 0.261±0.09 0.322±0.03 0.378±0.27 0.078±0.00 0.201±0.11 0.051±0.03 0.201±0.05 0.094±0.02 0.149±0.04 0.200±0.10 0.177±0.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000Q8 CIL_0000Q8_0002 CGP 2:80500512-80632361

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000307839 RPL15-001 protein_coding Homo_sapiens 0 728
ENST00000354811 RPL15-007 protein_coding Homo_sapiens 0 728
ENST00000391491 RPL15P3-001 processed_pseudogene Homo_sapiens 0 712
ENST00000412097 RPL15-011 protein_coding Homo_sapiens 0 606
ENST00000413699 RPL15-002 protein_coding Homo_sapiens 0 728
ENST00000415719 RPL15-013 protein_coding Homo_sapiens 0 728
ENST00000416278 RP11-570G20.1-001 processed_pseudogene Homo_sapiens 0 507
ENST00000416625 RPL15P4-001 processed_pseudogene Homo_sapiens 0 333
ENST00000417590 RPL15P4-001 processed_pseudogene Homo_sapiens 0 333
ENST00000419391 RPL15P4-001 processed_pseudogene Homo_sapiens 0 331
ENST00000422218 RPL15-009 protein_coding Homo_sapiens 0 453
ENST00000422915 RP1-40G4P.1-001 processed_pseudogene Homo_sapiens 0 433
ENST00000429515 AC097523.1-001 processed_pseudogene Homo_sapiens 0 468
ENST00000432924 RPL15P18-001 processed_pseudogene Homo_sapiens 0 606
ENST00000434031 RPL15-014 protein_coding Homo_sapiens 0 621
ENST00000435882 RPL15-005 protein_coding Homo_sapiens 0 728
ENST00000436146 RPL15-008 nonsense_mediated_decay Homo_sapiens 0 676
ENST00000439829 AP002381.2-001 processed_pseudogene Homo_sapiens 0 536
ENST00000445480 RPL15P4-001 processed_pseudogene Homo_sapiens 0 333
ENST00000450413 RPL15P4-001 processed_pseudogene Homo_sapiens 0 333
ENST00000451666 RPL15P4-001 processed_pseudogene Homo_sapiens 0 333
ENST00000456043 RPL15P4-001 processed_pseudogene Homo_sapiens 0 327
ENST00000456530 RPL15-201 protein_coding Homo_sapiens 0 396
ENST00000457032 RPL15P4-001 processed_pseudogene Homo_sapiens 0 327
ENST00000465786 RPL15-006 retained_intron Homo_sapiens 0 398
ENST00000475247 RP11-214O14.1-001 processed_pseudogene Homo_sapiens 0 479
ENST00000475768 AP000797.1-001 processed_pseudogene Homo_sapiens 0 514
ENST00000477936 RP11-113C12.2-001 processed_pseudogene Homo_sapiens 0 590
ENST00000482912 RPL15P20-001 processed_pseudogene Homo_sapiens 0 490
ENST00000486836 RP11-113A11.1-001 processed_pseudogene Homo_sapiens 0 547
ENST00000487352 RP11-100N21.1-001 processed_pseudogene Homo_sapiens 0 678
ENST00000490223 RPL15-004 retained_intron Homo_sapiens 0 527
ENST00000490252 RPL15P2-001 processed_pseudogene Homo_sapiens 0 562
ENST00000611050 RPL15-202 protein_coding Homo_sapiens 0 728

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