C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000449688 RP4-738P11.3-001 ENSG00000227777 9606 + 1:168542737-168543354 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalMuscleOvaryPlacentaENST00000449688
Transcript ID Adipose Adrenal Muscle Ovary Placenta
ENST00000449688 0.052±0.00 0.110±0.00 0.024±0.00 0.052±0.00 0.079±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000085365 Gm16477-001 processed_pseudogene Mus_musculus 0 433
ENSMUST00000118791 Rpl7a-ps11-001 processed_pseudogene Mus_musculus 0 427
ENSMUST00000190511 RP23-58N8.1-001 processed_pseudogene Mus_musculus 0 427
ENSMUST00000090170 Rpl7a-ps3-201 protein_coding Mus_musculus 0 427
ENSMUST00000137376 Rpl7a-004 processed_transcript Mus_musculus 0 422
ENSMUST00000102898 Rpl7a-001 protein_coding Mus_musculus 0 422
ENSMUST00000190579 Rpl7a-ps10-001 processed_pseudogene Mus_musculus 0 411
ENSMUST00000071172 RP23-58N8.4-001 processed_pseudogene Mus_musculus 0 407
ENSMUST00000183380 Gm17828-001 processed_pseudogene Mus_musculus 0 405
ENSMUST00000096427 Gm17415-001 processed_pseudogene Mus_musculus 0 405
ENSMUST00000136269 Rpl7a-002 processed_transcript Mus_musculus 0 401
ENSMUST00000095218 Rpl7a-ps5-201 protein_coding Mus_musculus 0 399
ENSMUST00000162120 Gm7418-001 processed_pseudogene Mus_musculus 0 394
ENSMUST00000118838 Gm11362-001 processed_pseudogene Mus_musculus 0 388
ENSMUST00000145247 Gm6286-001 processed_pseudogene Mus_musculus 0 385
ENSMUST00000119745 Gm13864-001 processed_pseudogene Mus_musculus 0 381
ENSMUST00000191231 RP24-217I2.2-001 processed_pseudogene Mus_musculus 0 375
ENSMUST00000120032 Gm13666-001 processed_pseudogene Mus_musculus 0 364
ENSMUST00000117398 Gm8250-001 processed_pseudogene Mus_musculus 0 353
ENSMUST00000171235 Gm5459-001 processed_pseudogene Mus_musculus 0 344
ENSMUST00000122355 Gm11760-001 processed_pseudogene Mus_musculus 0 340
ENSMUST00000120384 Rpl7a-ps12-001 processed_pseudogene Mus_musculus 0 339
ENSMUST00000143678 Rpl7a-003 processed_transcript Mus_musculus 0 318
ENSMUST00000151645 Gm7847-001 processed_pseudogene Mus_musculus 0 316
ENSMUST00000120504 Gm12124-001 processed_pseudogene Mus_musculus 0 294
ENSMUST00000119982 Gm15007-001 processed_pseudogene Mus_musculus 0.00000002 64
ENSMUST00000118404 Gm12713-001 processed_pseudogene Mus_musculus 0.00004 53

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