C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 5459
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000171235 Gm5459-001 ENSMUSG00000090305 10090 - 14:31076638-31077435 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000171235
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000171235 0.191±0.07 0.156±0.05 0.106±0.06 0.204±0.07 0.352±0.18 0.202±0.10 0.194±0.07 0.145±0.03 0.110±0.06 0.325±0.09 0.398±0.24 0.140±0.07 0.193±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WP CIL_0007WP_0002 VISTA 14:30932335-31535522

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000315731 RPL7A-005 protein_coding Homo_sapiens 4.00001e-40 169
ENST00000323345 RPL7A-009 protein_coding Homo_sapiens 0 815
ENST00000393397 AC005042.2-001 processed_pseudogene Homo_sapiens 0 575
ENST00000396414 RP11-242C24.2-001 processed_pseudogene Homo_sapiens 0 544
ENST00000401715 RP3-486D24.1-001 processed_pseudogene Homo_sapiens 0 654
ENST00000417617 AC004129.9-001 processed_pseudogene Homo_sapiens 0 534
ENST00000418052 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 669
ENST00000423357 RPL7AP25-001 processed_pseudogene Homo_sapiens 0 507
ENST00000424041 RPL7AP14-001 processed_pseudogene Homo_sapiens 0 656
ENST00000426573 RP4-738P11.4-001 processed_pseudogene Homo_sapiens 0 427
ENST00000426651 RPL7A-004 protein_coding Homo_sapiens 0 459
ENST00000427056 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 686
ENST00000428027 RP11-534L20.4-001 processed_pseudogene Homo_sapiens 0 726
ENST00000429766 AC073900.4-001 processed_pseudogene Homo_sapiens 0 486
ENST00000430506 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 680
ENST00000430732 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 669
ENST00000434317 RP11-577H5.1-001 processed_pseudogene Homo_sapiens 0 634
ENST00000437448 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 669
ENST00000441433 RPL7AP38-001 processed_pseudogene Homo_sapiens 0 534
ENST00000445592 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 680
ENST00000449688 RP4-738P11.3-001 processed_pseudogene Homo_sapiens 0 344
ENST00000451600 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 669
ENST00000452821 RP11-170M17.2-001 processed_pseudogene Homo_sapiens 0 699
ENST00000453064 RP11-467H10.1-001 processed_pseudogene Homo_sapiens 0 623
ENST00000453429 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 669
ENST00000463740 RPL7A-001 processed_transcript Homo_sapiens 0 460
ENST00000468019 RPL7A-003 processed_transcript Homo_sapiens 0 815
ENST00000469026 RPL7AP60-001 processed_pseudogene Homo_sapiens 0 719
ENST00000473054 RP11-204K16.1-001 processed_pseudogene Homo_sapiens 0 616
ENST00000473913 RP11-463O9.1-001 processed_pseudogene Homo_sapiens 0 680
ENST00000476420 RPL7AP56-001 processed_pseudogene Homo_sapiens 0 337
ENST00000477943 RPL7AP6-001 processed_pseudogene Homo_sapiens 0 793
ENST00000482859 RPL7AP30-001 processed_pseudogene Homo_sapiens 0 749
ENST00000485706 RPL7A-006 processed_transcript Homo_sapiens 0 431
ENST00000486157 RP11-342F17.2-001 processed_pseudogene Homo_sapiens 0 586
ENST00000486538 RPL7AP11-001 processed_pseudogene Homo_sapiens 0 702
ENST00000488538 RPL7AP26-001 processed_pseudogene Homo_sapiens 0 621
ENST00000496515 RPL7AP2-001 processed_pseudogene Homo_sapiens 0 455
ENST00000496554 RPL7A-002 processed_transcript Homo_sapiens 0 553
ENST00000496790 FAM185A-005 processed_transcript Homo_sapiens 0 207
ENST00000497325 CTD-2270N23.1-001 processed_pseudogene Homo_sapiens 0 726
ENST00000525465 RP11-58K22.2-001 processed_pseudogene Homo_sapiens 0 562
ENST00000541658 RPL7AP3-001 processed_pseudogene Homo_sapiens 0 407
ENST00000588490 RPL7AP66-001 processed_pseudogene Homo_sapiens 0 782

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