C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 8226
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000190511 RP23-58N8.1-001 ENSMUSG00000099927 10090 + 9:84423984-84424781 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungOvaryTestisENSMUST00000190511
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Ovary Testis
ENSMUST00000190511 0.049±0.01 0.472±0.10 0.226±0.06 0.595±0.39 0.072±0.04 0.421±0.28 1.079±0.29 0.147±0.09 0.499±0.50 0.064±0.02

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000315731 RPL7A-005 protein_coding Homo_sapiens 0 213
ENST00000323345 RPL7A-009 protein_coding Homo_sapiens 0 965
ENST00000393397 AC005042.2-001 processed_pseudogene Homo_sapiens 0 697
ENST00000396414 RP11-242C24.2-001 processed_pseudogene Homo_sapiens 0 643
ENST00000401715 RP3-486D24.1-001 processed_pseudogene Homo_sapiens 0 787
ENST00000417617 AC004129.9-001 processed_pseudogene Homo_sapiens 0 656
ENST00000418052 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 791
ENST00000423357 RPL7AP25-001 processed_pseudogene Homo_sapiens 0 512
ENST00000424041 RPL7AP14-001 processed_pseudogene Homo_sapiens 0 771
ENST00000426573 RP4-738P11.4-001 processed_pseudogene Homo_sapiens 0 510
ENST00000426651 RPL7A-004 protein_coding Homo_sapiens 0 604
ENST00000427056 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 808
ENST00000428027 RP11-534L20.4-001 processed_pseudogene Homo_sapiens 0 800
ENST00000429766 AC073900.4-001 processed_pseudogene Homo_sapiens 0 575
ENST00000430506 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 802
ENST00000430732 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 791
ENST00000434317 RP11-577H5.1-001 processed_pseudogene Homo_sapiens 0 713
ENST00000437448 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 791
ENST00000441433 RPL7AP38-001 processed_pseudogene Homo_sapiens 0 662
ENST00000445592 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 802
ENST00000449688 RP4-738P11.3-001 processed_pseudogene Homo_sapiens 0 427
ENST00000451600 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 791
ENST00000452821 RP11-170M17.2-001 processed_pseudogene Homo_sapiens 0 821
ENST00000453064 RP11-467H10.1-001 processed_pseudogene Homo_sapiens 0 708
ENST00000453429 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 791
ENST00000463740 RPL7A-001 processed_transcript Homo_sapiens 0 610
ENST00000468019 RPL7A-003 processed_transcript Homo_sapiens 0 961
ENST00000469026 RPL7AP60-001 processed_pseudogene Homo_sapiens 0 830
ENST00000473054 RP11-204K16.1-001 processed_pseudogene Homo_sapiens 0 737
ENST00000473913 RP11-463O9.1-001 processed_pseudogene Homo_sapiens 0 802
ENST00000476420 RPL7AP56-001 processed_pseudogene Homo_sapiens 0 403
ENST00000477943 RPL7AP6-001 processed_pseudogene Homo_sapiens 0 931
ENST00000482859 RPL7AP30-001 processed_pseudogene Homo_sapiens 0 881
ENST00000483820 RPL7AP4-001 processed_pseudogene Homo_sapiens 0 634
ENST00000485706 RPL7A-006 processed_transcript Homo_sapiens 0 508
ENST00000486157 RP11-342F17.2-001 processed_pseudogene Homo_sapiens 0 684
ENST00000486538 RPL7AP11-001 processed_pseudogene Homo_sapiens 0 846
ENST00000488538 RPL7AP26-001 processed_pseudogene Homo_sapiens 0 732
ENST00000496515 RPL7AP2-001 processed_pseudogene Homo_sapiens 0 549
ENST00000496554 RPL7A-002 processed_transcript Homo_sapiens 0 697
ENST00000496790 FAM185A-005 processed_transcript Homo_sapiens 0 248
ENST00000497325 CTD-2270N23.1-001 processed_pseudogene Homo_sapiens 0 870
ENST00000541658 RPL7AP3-001 processed_pseudogene Homo_sapiens 0 473
ENST00000557949 RP11-356M20.1-001 processed_pseudogene Homo_sapiens 0 595
ENST00000588490 RPL7AP66-001 processed_pseudogene Homo_sapiens 0 931

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