C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 11362
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118838 Gm11362-001 ENSMUSG00000082861 10090 + 13:28836875-28837724 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000118838
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000118838 0.156±0.05 0.086±0.00 0.413±0.00 0.270±0.01 0.086±0.00 0.079±0.03 0.111±0.07 0.060±0.04 0.200±0.09 0.070±0.01 0.154±0.02 0.105±0.01 0.074±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YC CIL_0008YC_0002 VISTA 13:28417646-29019441
CIL_00084D CIL_00084D_0002 VISTA 13:28658215-29260360

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000315731 RPL7A-005 protein_coding Homo_sapiens 2e-38 163
ENST00000323345 RPL7A-009 protein_coding Homo_sapiens 0 656
ENST00000393397 AC005042.2-001 processed_pseudogene Homo_sapiens 0 481
ENST00000396414 RP11-242C24.2-001 processed_pseudogene Homo_sapiens 0 427
ENST00000401715 RP3-486D24.1-001 processed_pseudogene Homo_sapiens 0 551
ENST00000417617 AC004129.9-001 processed_pseudogene Homo_sapiens 0 448
ENST00000426573 RP4-738P11.4-001 processed_pseudogene Homo_sapiens 0 368
ENST00000426651 RPL7A-004 protein_coding Homo_sapiens 0 514
ENST00000428027 RP11-534L20.4-001 processed_pseudogene Homo_sapiens 0 625
ENST00000429766 AC073900.4-001 processed_pseudogene Homo_sapiens 0 435
ENST00000434317 RP11-577H5.1-001 processed_pseudogene Homo_sapiens 0 507
ENST00000441433 RPL7AP38-001 processed_pseudogene Homo_sapiens 0 422
ENST00000449688 RP4-738P11.3-001 processed_pseudogene Homo_sapiens 0 388
ENST00000452821 RP11-170M17.2-001 processed_pseudogene Homo_sapiens 0 597
ENST00000453064 RP11-467H10.1-001 processed_pseudogene Homo_sapiens 0 496
ENST00000463740 RPL7A-001 processed_transcript Homo_sapiens 0 516
ENST00000468019 RPL7A-003 processed_transcript Homo_sapiens 0 656
ENST00000469026 RPL7AP60-001 processed_pseudogene Homo_sapiens 0 593
ENST00000473054 RP11-204K16.1-001 processed_pseudogene Homo_sapiens 0 538
ENST00000476420 RPL7AP56-001 processed_pseudogene Homo_sapiens 0 237
ENST00000477943 RPL7AP6-001 processed_pseudogene Homo_sapiens 0 640
ENST00000482859 RPL7AP30-001 processed_pseudogene Homo_sapiens 0 595
ENST00000483820 RPL7AP4-001 processed_pseudogene Homo_sapiens 0 422
ENST00000485706 RPL7A-006 processed_transcript Homo_sapiens 0 420
ENST00000486157 RP11-342F17.2-001 processed_pseudogene Homo_sapiens 0 466
ENST00000488538 RPL7AP26-001 processed_pseudogene Homo_sapiens 0 503
ENST00000496515 RPL7AP2-001 processed_pseudogene Homo_sapiens 0 405
ENST00000496554 RPL7A-002 processed_transcript Homo_sapiens 0 603
ENST00000496790 FAM185A-005 processed_transcript Homo_sapiens 0 215
ENST00000497325 CTD-2270N23.1-001 processed_pseudogene Homo_sapiens 0 556
ENST00000525465 RP11-58K22.2-001 processed_pseudogene Homo_sapiens 0 475
ENST00000541658 RPL7AP3-001 processed_pseudogene Homo_sapiens 0 289
ENST00000557949 RP11-356M20.1-001 processed_pseudogene Homo_sapiens 0 342
ENST00000588490 RPL7AP66-001 processed_pseudogene Homo_sapiens 0 621

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