C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted pseudogene 7418
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000162120 Gm7418-001 ENSMUSG00000090188 10090 + 8:94835717-94836517 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000162120
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000162120 0.251±0.13 0.578±0.20 0.080±0.00 0.306±0.16 0.184±0.09 0.421±0.12 0.285±0.09 0.410±0.36 0.207±0.11 0.063±0.02 0.410±0.16 0.203±0.09 0.366±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003ZF CIL_0003ZF_0002 CGP 8:94810453-94838358
CIL_0003ZC CIL_0003ZC_0002 CGP 8:94819818-94854895

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000315731 RPL7A-005 protein_coding Homo_sapiens 4.2039e-45 185
ENST00000323345 RPL7A-009 protein_coding Homo_sapiens 0 870
ENST00000393397 AC005042.2-001 processed_pseudogene Homo_sapiens 0 619
ENST00000396414 RP11-242C24.2-001 processed_pseudogene Homo_sapiens 0 569
ENST00000401715 RP3-486D24.1-001 processed_pseudogene Homo_sapiens 0 704
ENST00000417617 AC004129.9-001 processed_pseudogene Homo_sapiens 0 595
ENST00000418052 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 715
ENST00000424041 RPL7AP14-001 processed_pseudogene Homo_sapiens 0 693
ENST00000426573 RP4-738P11.4-001 processed_pseudogene Homo_sapiens 0 448
ENST00000426651 RPL7A-004 protein_coding Homo_sapiens 0 525
ENST00000427056 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 737
ENST00000428027 RP11-534L20.4-001 processed_pseudogene Homo_sapiens 0 739
ENST00000429766 AC073900.4-001 processed_pseudogene Homo_sapiens 0 525
ENST00000430506 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 732
ENST00000430732 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 715
ENST00000434317 RP11-577H5.1-001 processed_pseudogene Homo_sapiens 0 652
ENST00000437448 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 715
ENST00000441433 RPL7AP38-001 processed_pseudogene Homo_sapiens 0 590
ENST00000445592 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 732
ENST00000449688 RP4-738P11.3-001 processed_pseudogene Homo_sapiens 0 394
ENST00000451600 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 715
ENST00000452821 RP11-170M17.2-001 processed_pseudogene Homo_sapiens 0 743
ENST00000453064 RP11-467H10.1-001 processed_pseudogene Homo_sapiens 0 647
ENST00000453429 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 715
ENST00000463740 RPL7A-001 processed_transcript Homo_sapiens 0 529
ENST00000468019 RPL7A-003 processed_transcript Homo_sapiens 0 867
ENST00000469026 RPL7AP60-001 processed_pseudogene Homo_sapiens 0 758
ENST00000473054 RP11-204K16.1-001 processed_pseudogene Homo_sapiens 0 676
ENST00000476420 RPL7AP56-001 processed_pseudogene Homo_sapiens 0 357
ENST00000477943 RPL7AP6-001 processed_pseudogene Homo_sapiens 0 837
ENST00000482859 RPL7AP30-001 processed_pseudogene Homo_sapiens 0 804
ENST00000483820 RPL7AP4-001 processed_pseudogene Homo_sapiens 0 545
ENST00000485706 RPL7A-006 processed_transcript Homo_sapiens 0 436
ENST00000486157 RP11-342F17.2-001 processed_pseudogene Homo_sapiens 0 630
ENST00000488538 RPL7AP26-001 processed_pseudogene Homo_sapiens 0 654
ENST00000496515 RPL7AP2-001 processed_pseudogene Homo_sapiens 0 510
ENST00000496554 RPL7A-002 processed_transcript Homo_sapiens 0 625
ENST00000496790 FAM185A-005 processed_transcript Homo_sapiens 0 226
ENST00000497325 CTD-2270N23.1-001 processed_pseudogene Homo_sapiens 0 773
ENST00000525465 RP11-58K22.2-001 processed_pseudogene Homo_sapiens 0 579
ENST00000541658 RPL7AP3-001 processed_pseudogene Homo_sapiens 0 431
ENST00000588490 RPL7AP66-001 processed_pseudogene Homo_sapiens 0 837

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