C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L17 pseudogene 41
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000469329 RPL17P41-001 ENSG00000213179 9606 + 17:67784753-67785293 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungMuscleOvaryTestisENST00000469329
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Muscle Ovary Testis
ENST00000469329 0.244±0.00 0.305±0.00 0.026±0.00 0.224±0.00 0.163±0.00 0.126±0.00 0.022±0.00 0.070±0.00 0.067±0.00 0.070±0.00 0.045±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000121001 Rpl17-ps5-001 processed_pseudogene Mus_musculus 0 558
ENSMUST00000118924 Rpl17-ps8-001 processed_pseudogene Mus_musculus 0 553
ENSMUST00000079716 Rpl17-201 protein_coding Mus_musculus 0 553
ENSMUST00000120241 Rpl17-ps4-001 processed_pseudogene Mus_musculus 0 547
ENSMUST00000173076 Gm3617-001 processed_pseudogene Mus_musculus 0 542
ENSMUST00000085340 Gm10268-201 processed_pseudogene Mus_musculus 0 542
ENSMUST00000119541 Rpl17-ps9-001 processed_pseudogene Mus_musculus 0 542
ENSMUST00000119383 Rpl17-ps10-001 processed_pseudogene Mus_musculus 0 536
ENSMUST00000117614 Gm11531-001 processed_pseudogene Mus_musculus 0 536
ENSMUST00000119731 Gm4986-001 processed_pseudogene Mus_musculus 0 503
ENSMUST00000185778 RP24-178O17.1-001 processed_pseudogene Mus_musculus 0 486
ENSMUST00000162765 Gm9719-001 processed_pseudogene Mus_musculus 0 483
ENSMUST00000160969 Gm15795-001 processed_pseudogene Mus_musculus 0 477
ENSMUST00000119156 Rpl17-ps1-001 processed_pseudogene Mus_musculus 0 477
ENSMUST00000120579 Gm11343-001 processed_pseudogene Mus_musculus 0 466
ENSMUST00000189856 RP23-110B5.4-001 processed_pseudogene Mus_musculus 0 451
ENSMUST00000164501 Gm17214-001 processed_pseudogene Mus_musculus 0 442
ENSMUST00000120830 Gm13665-001 processed_pseudogene Mus_musculus 0 420
ENSMUST00000185744 RP23-304F24.3-001 processed_pseudogene Mus_musculus 0 394
ENSMUST00000121960 Gm14441-001 processed_pseudogene Mus_musculus 0 394
ENSMUST00000121672 Gm11363-001 processed_pseudogene Mus_musculus 0 331
ENSMUST00000164923 Gm5277-201 protein_coding Mus_musculus 0 322
ENSMUST00000117144 Gm6429-001 processed_pseudogene Mus_musculus 0 302
ENSMUST00000118691 Gm11199-001 processed_pseudogene Mus_musculus 0 202

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