C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | heterogeneous nuclear ribonucleoprotein A1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000547870  |
HNRNPA1-016 |
ENSG00000135486 |
9606 | + |
12:54280749-54282472  |
retained_intron |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007SU | CIL_0007SU_0001 | VISTA | 12:53718454-54321661 |
| CIL_00084M | CIL_00084M_0001 | VISTA | 12:53732854-54334005 |
| CIL_0002TM | CIL_0002TM_0002 | CGP | 12:54230940-54287088 |
| CIL_0002TL | CIL_0002TL_0002 | CGP | 12:54280193-54301121 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000168019
|
Gm10052-001 | processed_pseudogene | Mus_musculus | 0 | 632 |
|
ENSMUST00000117081
|
Gm5643-001 | processed_pseudogene | Mus_musculus | 0 | 632 |
|
ENSMUST00000087351
|
Hnrnpa1-202 | protein_coding | Mus_musculus | 0 | 632 |
|
ENSMUST00000036004
|
Hnrnpa1-201 | protein_coding | Mus_musculus | 0 | 632 |
|
ENSMUST00000050143
|
Gm7729-001 | unprocessed_pseudogene | Mus_musculus | 0 | 627 |
|
ENSMUST00000118970
|
Gm16216-001 | processed_pseudogene | Mus_musculus | 0 | 610 |
|
ENSMUST00000181363
|
Gm8652-001 | processed_pseudogene | Mus_musculus | 0 | 593 |
|
ENSMUST00000022493
|
Gm5803-001 | processed_pseudogene | Mus_musculus | 0 | 588 |
|
ENSMUST00000129154
|
Hnrnpa1l2-ps-001 | processed_pseudogene | Mus_musculus | 0 | 568 |
|
ENSMUST00000040649
|
AC165425.1-201 | pseudogene | Mus_musculus | 0 | 508 |
|
ENSMUST00000119097
|
Gm13418-001 | processed_pseudogene | Mus_musculus | 0 | 464 |
|
ENSMUST00000122346
|
Gm11860-001 | processed_pseudogene | Mus_musculus | 0 | 464 |
|
ENSMUST00000119387
|
Gm12458-001 | processed_pseudogene | Mus_musculus | 0 | 448 |
|
ENSMUST00000184038
|
Gm5269-001 | translated_processed_pseudogene | Mus_musculus | 0 | 442 |
|
ENSMUST00000189260
|
RP23-389M9.4-001 | processed_pseudogene | Mus_musculus | 0 | 435 |
|
ENSMUST00000120205
|
Gm13297-001 | processed_pseudogene | Mus_musculus | 0 | 337 |
|
ENSMUST00000178732
|
RP24-383H12.1-001 | processed_pseudogene | Mus_musculus | 0 | 326 |
|
ENSMUST00000122005
|
Gm12382-001 | processed_pseudogene | Mus_musculus | 0 | 265 |
|
ENSMUST00000183590
|
Gm5269-002 | protein_coding | Mus_musculus | 3e-38 | 163 |
