C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0003DI_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSDARG00000073850-ENSDARG00000070721 | CGP | 7955 | 6:38835911-38937313  |
|
| Gene | Transcript | Position | Biotype | |
ENSDARG00000070721  (vdrb)vitamin D receptor b |
ENSDART00000104116 (vdrb-201)
|
38885926-38908301 | protein_coding | |
|
ENSDART00000150885 (vdrb-001)
|
38885597-38937313 | protein_coding | ||
|
ENSDART00000151750 (vdrb-002)
|
38907880-38935997 | protein_coding | ||
|
ENSDARG00000073850 (HDAC7) histone deacetylase 7 |
ENSDART00000099842 (HDAC7-201)
|
38836472-38856383 | protein_coding | |
|
ENSDART00000154151 (HDAC7-001)
|
38835911-38861590 | protein_coding | ||
|
ENSDART00000156667 (HDAC7-002)
|
38837615-38838877 | retained_intron | ||
| CIL_0003DI_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000061273-ENSG00000111424 | CGP | 9606 | 12:47782722-47943048 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSG00000061273 (HDAC7) histone deacetylase 7 |
ENST00000080059 (HDAC7-001)
|
47782722-47819785 | protein_coding | |
|
ENST00000354334 (HDAC7-002)
|
47782722-47819866 | protein_coding | ||
|
ENST00000380610 (HDAC7-029)
|
47783721-47802512 | protein_coding | ||
|
ENST00000417107 (HDAC7-009)
|
47798560-47819980 | protein_coding | ||
|
ENST00000417902 (HDAC7-018)
|
47798118-47819961 | protein_coding | ||
|
ENST00000421231 (HDAC7-016)
|
47797430-47813051 | protein_coding | ||
|
ENST00000422254 (HDAC7-021)
|
47797107-47813051 | protein_coding | ||
|
ENST00000425451 (HDAC7-017)
|
47795377-47819883 | nonsense_mediated_decay | ||
|
ENST00000427332 (HDAC7-013)
|
47783841-47820612 | protein_coding | ||
|
ENST00000430670 (HDAC7-019)
|
47795667-47819875 | protein_coding | ||
|
ENST00000433685 (HDAC7-011)
|
47798188-47820573 | protein_coding | ||
|
ENST00000434070 (HDAC7-014)
|
47797384-47833132 | protein_coding | ||
|
ENST00000440293 (HDAC7-020)
|
47797118-47819886 | protein_coding | ||
|
ENST00000445237 (HDAC7-015)
|
47798640-47813484 | protein_coding | ||
|
ENST00000447463 (HDAC7-012)
|
47797384-47820601 | protein_coding | ||
|
ENST00000450805 (HDAC7-010)
|
47798114-47819262 | protein_coding | ||
|
ENST00000459625 (HDAC7-007)
|
47782726-47793498 | retained_intron | ||
|
ENST00000463732 (HDAC7-023)
|
47794836-47795850 | retained_intron | ||
|
ENST00000470668 (HDAC7-005)
|
47782726-47798189 | retained_intron | ||
|
ENST00000471235 (HDAC7-008)
|
47785451-47788169 | retained_intron | ||
|
ENST00000477203 (HDAC7-030)
|
47783674-47799140 | nonsense_mediated_decay | ||
|
ENST00000477937 (HDAC7-026)
|
47790377-47793386 | processed_transcript | ||
|
ENST00000485796 (HDAC7-022)
|
47794869-47797492 | nonsense_mediated_decay | ||
|
ENST00000488927 (HDAC7-027)
|
47788096-47792000 | nonsense_mediated_decay | ||
|
ENST00000491464 (HDAC7-024)
|
47794807-47795604 | retained_intron | ||
|
ENST00000547259 (HDAC7-004)
|
47783800-47786667 | nonsense_mediated_decay | ||
|
ENST00000548080 (HDAC7-031)
|
47783516-47792004 | protein_coding | ||
|
ENST00000548938 (HDAC7-003)
|
47782726-47793542 | nonsense_mediated_decay | ||
|
ENST00000549883 (HDAC7-033)
|
47783638-47785381 | processed_transcript | ||
|
ENST00000552960 (HDAC7-028)
|
47783651-47819886 | protein_coding | ||
|
ENSG00000111424 (VDR) vitamin D (1,25- dihydroxyvitamin D3) receptor |
ENST00000229022 (VDR-201)
|
47841539-47905031 | protein_coding | |
|
ENST00000395324 (VDR-001)
|
47841537-47943048 | protein_coding | ||
|
ENST00000546653 (VDR-007)
|
47855634-47905016 | protein_coding | ||
|
ENST00000547065 (VDR-003)
|
47844470-47905022 | nonsense_mediated_decay | ||
|
ENST00000548664 (VDR-006)
|
47857661-47905040 | protein_coding | ||
|
ENST00000549336 (VDR-004)
|
47841537-47905022 | protein_coding | ||
|
ENST00000550314 (VDR-008)
|
47857648-47882935 | protein_coding | ||
|
ENST00000550325 (VDR-002)
|
47842628-47905003 | protein_coding | ||
|
ENSG00000211584 (SLC48A1) solute carrier family 48 (heme transporter), member 1 |
ENST00000442218 (SLC48A1-001)
|
47773208-47782753 | protein_coding | |
|
ENST00000442892 (SLC48A1-002)
|
47771587-47782751 | protein_coding | ||
|
ENST00000461620 (SLC48A1-004)
|
47778355-47779193 | processed_transcript | ||
|
ENST00000476104 (SLC48A1-005)
|
47778366-47779192 | processed_transcript | ||
|
ENST00000547002 (SLC48A1-007)
|
47758578-47780307 | protein_coding | ||
|
ENST00000548498 (SLC48A1-008)
|
47753916-47779171 | protein_coding | ||
|
ENST00000549243 (SLC48A1-009)
|
47758994-47779111 | protein_coding | ||
|
ENST00000551301 (SLC48A1-006)
|
47773215-47780824 | nonsense_mediated_decay | ||
|
ENST00000552003 (SLC48A1-010)
|
47753930-47756485 | retained_intron | ||
|
ENSG00000268069 (RP5-1057I20.4) |
ENST00000599515 (RP5-1057I20.4-001)
|
47784923-47786002 | antisense | |
|
ENSG00000274737 (RP5-1057I20.6) |
ENST00000614749 (RP5-1057I20.6-001)
|
47817451-47817966 | sense_intronic | |
|
ENSG00000278385 (RP11-89H19.2) |
ENST00000622535 (RP11-89H19.2-001)
|
47905122-47906865 | lincRNA | |
| CIL_0003DI_0003 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000022475-ENSMUSG00000022479 | CGP | 10090 | 15:97792664-97910630 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000022475 (Hdac7) histone deacetylase 7 |
ENSMUST00000079838 (Hdac7-006)
|
97792664-97831494 | protein_coding | |
|
ENSMUST00000088402 (Hdac7-005)
|
97792681-97831767 | protein_coding | ||
|
ENSMUST00000116408 (Hdac7-001)
|
97792666-97844502 | protein_coding | ||
|
ENSMUST00000116409 (Hdac7-002)
|
97792690-97844302 | protein_coding | ||
|
ENSMUST00000118294 (Hdac7-007)
|
97792709-97831494 | protein_coding | ||
|
ENSMUST00000119670 (Hdac7-003)
|
97792688-97844269 | protein_coding | ||
|
ENSMUST00000120683 (Hdac7-004)
|
97792709-97844164 | protein_coding | ||
|
ENSMUST00000121514 (Hdac7-008)
|
97792688-97814863 | protein_coding | ||
|
ENSMUST00000134258 (Hdac7-011)
|
97801282-97807984 | protein_coding | ||
|
ENSMUST00000135651 (Hdac7-012)
|
97799609-97807633 | protein_coding | ||
|
ENSMUST00000151334 (Hdac7-010)
|
97792687-97794445 | retained_intron | ||
|
ENSMUST00000156045 (Hdac7-009)
|
97797799-97831469 | nonsense_mediated_decay | ||
|
ENSMUSG00000022479 (Vdr) vitamin D receptor |
ENSMUST00000023119 (Vdr-001)
|
97854425-97908310 | protein_coding | |
|
ENSMUST00000126568 (Vdr-002)
|
97876776-97896813 | protein_coding | ||
|
ENSMUST00000139656 (Vdr-003)
|
97857537-97859698 | retained_intron | ||
|
ENSMUST00000173104 (Vdr-006)
|
97876848-97910630 | protein_coding | ||
|
ENSMUST00000173611 (Vdr-005)
|
97884889-97909562 | protein_coding | ||
|
ENSMUST00000174633 (Vdr-004)
|
97884877-97910630 | protein_coding | ||
|
ENSMUSG00000081534 (Slc48a1) solute carrier family 48 (heme transporter), member 1 |
ENSMUST00000117892 (Slc48a1-001)
|
97784355-97792692 | protein_coding | |
|
ENSMUST00000135073 (Slc48a1-002)
|
97784428-97789963 | nonsense_mediated_decay | ||
Expression Patterns
|
