| Transcript ID | Brain | Heart | Kidney | Muscle |
|---|---|---|---|---|
| ENSDART00000011718 | 0.028±0.02 | 0.030±0.00 | 0.099±0.00 | 0.006±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | sodium channel, voltage-gated, type I, alpha | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSDART00000011718  |
scn1a-201 |
ENSDARG00000010783 |
7955 | + |
9:50902616-50972365  |
protein_coding |
Expression Patterns
|
Conserved Regions |
|---|
| Gene is not located within a conserved region. |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0001518 | IEA | voltage-gated sodium channel complex |
| GO:0005216 | IEA | ion channel activity |
| GO:0005244 | IEA | voltage-gated ion channel activity |
| GO:0005248 | IEA | voltage-gated sodium channel activity |
| GO:0005272 | IEA | sodium channel activity |
| GO:0005515 | IEA | protein binding |
| GO:0006810 | IEA | transport |
| GO:0006811 | IEA | ion transport |
| GO:0006814 | IEA | sodium ion transport |
| GO:0016020 | IEA | membrane |
| GO:0016021 | IEA | integral to membrane |
| GO:0034765 | IEA | regulation of ion transmembrane transport |
| GO:0055085 | IEA | transmembrane transport |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000021056
|
Scn4a-001 | protein_coding | Mus_musculus | 0 | 830 |
|
ENSMUST00000065196
|
Scn5a-201 | protein_coding | Mus_musculus | 0 | 292 |
|
ENSMUST00000066432
|
Scn3a-201 | protein_coding | Mus_musculus | 0 | 381 |
|
ENSMUST00000070617
|
Scn11a-201 | protein_coding | Mus_musculus | 0 | 198 |
|
ENSMUST00000077489
|
Scn1a-004 | protein_coding | Mus_musculus | 0 | 381 |
|
ENSMUST00000082209
|
Scn8a-201 | protein_coding | Mus_musculus | 0 | 351 |
|
ENSMUST00000084787
|
Scn10a-201 | protein_coding | Mus_musculus | 0 | 307 |
|
ENSMUST00000094951
|
Scn1a-005 | protein_coding | Mus_musculus | 0 | 381 |
|
ENSMUST00000100063
|
Scn9a-201 | protein_coding | Mus_musculus | 0 | 340 |
|
ENSMUST00000100064
|
Scn9a-001 | protein_coding | Mus_musculus | 0 | 340 |
|
ENSMUST00000100069
|
Scn3a-001 | protein_coding | Mus_musculus | 0 | 381 |
|
ENSMUST00000108908
|
Scn8a-203 | protein_coding | Mus_musculus | 0 | 351 |
|
ENSMUST00000108909
|
Scn8a-204 | protein_coding | Mus_musculus | 0 | 351 |
|
ENSMUST00000108910
|
Scn8a-205 | protein_coding | Mus_musculus | 0 | 351 |
|
ENSMUST00000112354
|
Scn9a-002 | protein_coding | Mus_musculus | 0 | 340 |
|
ENSMUST00000112366
|
Scn1a-001 | protein_coding | Mus_musculus | 0 | 381 |
|
ENSMUST00000112371
|
Scn1a-201 | protein_coding | Mus_musculus | 0 | 381 |
|
ENSMUST00000117911
|
Scn5a-001 | protein_coding | Mus_musculus | 0 | 292 |
|
ENSMUST00000120420
|
Scn5a-002 | protein_coding | Mus_musculus | 0 | 292 |
|
ENSMUST00000155838
|
Scn3a-003 | processed_transcript | Mus_musculus | 0 | 342 |
|
ENSMUST00000164384
|
Scn9a-202 | protein_coding | Mus_musculus | 0 | 340 |
|
ENSMUST00000169900
|
Scn9a-203 | protein_coding | Mus_musculus | 0 | 340 |
|
ENST00000333535
|
SCN5A-014 | protein_coding | Homo_sapiens | 0 | 265 |
|
ENST00000413689
|
SCN5A-001 | protein_coding | Homo_sapiens | 0 | 265 |
|
ENST00000414099
|
SCN5A-004 | protein_coding | Homo_sapiens | 0 | 265 |
|
ENST00000423572
|
SCN5A-003 | protein_coding | Homo_sapiens | 0 | 265 |
|
ENST00000425664
|
SCN5A-201 | protein_coding | Homo_sapiens | 0 | 265 |
|
ENST00000435607
|
SCN4A-201 | protein_coding | Homo_sapiens | 0 | 933 |
|
ENST00000443581
|
SCN5A-202 | protein_coding | Homo_sapiens | 0 | 265 |
|
ENST00000449557
|
SCN5A-010 | protein_coding | Homo_sapiens | 0 | 265 |
|
ENST00000450102
|
SCN5A-008 | protein_coding | Homo_sapiens | 0 | 265 |
|
ENST00000451551
|
SCN5A-203 | protein_coding | Homo_sapiens | 0 | 265 |
|
ENST00000455624
|
SCN5A-002 | protein_coding | Homo_sapiens | 0 | 265 |
|
ENST00000578147
|
SCN4A-001 | protein_coding | Homo_sapiens | 0 | 922 |
