C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zgc:65894
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000019573 zgc:65894-001 ENSDARG00000016301 7955 - 1:56764159-56770684 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000019573
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000019573 171.697±142.68 0.329±0.18 0.304±0.00 0.342±0.00 14.388±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003924 IEA GTPase activity
GO:0005200 IEA structural constituent of cytoskeleton
GO:0005525 IEA GTP binding
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0005874 IEA microtubule
GO:0006184 IEA GTP catabolic process
GO:0007017 IEA microtubule-based process
GO:0043234 IEA protein complex
GO:0051258 IEA protein polymerization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000001513 Tubb6-201 protein_coding Mus_musculus 0 1009
ENSMUST00000001566 Tubb5-001 protein_coding Mus_musculus 0 1190
ENSMUST00000043584 Tubb4b-001 protein_coding Mus_musculus 0 1170
ENSMUST00000071134 Tubb3-001 protein_coding Mus_musculus 0 1079
ENSMUST00000071135 Tubb4a-201 protein_coding Mus_musculus 0 1059
ENSMUST00000160140 Gm16165-001 processed_pseudogene Mus_musculus 0 520
ENSMUST00000173253 Tubb5-004 retained_intron Mus_musculus 0 616
ENSMUST00000179460 Tubb4b-ps1-201 protein_coding Mus_musculus 0 1116
ENST00000259818 TUBB2B-001 protein_coding Homo_sapiens 0 1264
ENST00000264071 TUBB4A-001 protein_coding Homo_sapiens 0 1245
ENST00000308911 RP11-683L23.1-201 protein_coding Homo_sapiens 0 874
ENST00000315491 TUBB3-001 protein_coding Homo_sapiens 0 1168
ENST00000333628 TUBB2A-001 protein_coding Homo_sapiens 0 1288
ENST00000340384 TUBB4B-001 protein_coding Homo_sapiens 0 1157
ENST00000415481 TUBB8P11-001 unprocessed_pseudogene Homo_sapiens 0 734
ENST00000427668 TUBBP10-001 processed_pseudogene Homo_sapiens 0 268
ENST00000437546 TUBB4BP3-001 processed_pseudogene Homo_sapiens 0 196
ENST00000458717 TUBB8P8-001 unprocessed_pseudogene Homo_sapiens 0 726
ENST00000473006 TUBB2B-002 processed_transcript Homo_sapiens 0 1208
ENST00000478631 SCP2-009 nonsense_mediated_decay Homo_sapiens 0 257
ENST00000540257 TUBB4A-201 protein_coding Homo_sapiens 0 1245
ENST00000554444 TUBB3-002 protein_coding Homo_sapiens 0 1127
ENST00000555609 TUBB3-013 nonsense_mediated_decay Homo_sapiens 0 1062
ENST00000556922 TUBB3-001 protein_coding Homo_sapiens 0 1127
ENST00000561967 TUBB8-007 protein_coding Homo_sapiens 0 841
ENST00000564130 TUBB8-005 protein_coding Homo_sapiens 0 756
ENST00000568584 TUBB8-001 protein_coding Homo_sapiens 0 918
ENST00000568866 TUBB8-008 protein_coding Homo_sapiens 0 756
ENST00000573909 RP11-683L23.1-002 protein_coding Homo_sapiens 0 739
ENST00000604929 TUBB4B-002 retained_intron Homo_sapiens 0 946

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