C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 5682
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000173402 Gm5682-001 ENSMUSG00000092265 10090 - 17:36210276-36211184 unprocessed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastENSMUST00000173402
Transcript ID Adipose Adrenal Bladder Breast
ENSMUST00000173402 0.084±0.00 0.186±0.00 0.023±0.00 0.115±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000259951 HLA-F-003 protein_coding Homo_sapiens 0 213
ENST00000334668 HLA-F-202 protein_coding Homo_sapiens 0 213
ENST00000342322 HLA-F-001 protein_coding Homo_sapiens 0 219
ENST00000359635 HLA-B-001 protein_coding Homo_sapiens 0 196
ENST00000360323 HLA-G-001 protein_coding Homo_sapiens 0 224
ENST00000376228 HLA-C-001 protein_coding Homo_sapiens 0 207
ENST00000376237 HLA-C-006 nonsense_mediated_decay Homo_sapiens 0 207
ENST00000376630 HLA-E-001 protein_coding Homo_sapiens 0 217
ENST00000376818 HLA-G-004 protein_coding Homo_sapiens 0 224
ENST00000376822 HLA-A-003 protein_coding Homo_sapiens 0 207
ENST00000376828 HLA-G-002 protein_coding Homo_sapiens 0 224
ENST00000376844 HLA-F-003 protein_coding Homo_sapiens 0 219
ENST00000376861 HLA-F-001 protein_coding Homo_sapiens 0 213
ENST00000383323 HLA-C-003 protein_coding Homo_sapiens 0 207
ENST00000383329 HLA-C-002 protein_coding Homo_sapiens 0 207
ENST00000383483 HLA-C-004 protein_coding Homo_sapiens 0 207
ENST00000383487 HLA-C-003 protein_coding Homo_sapiens 0 207
ENST00000383516 HLA-F-003 protein_coding Homo_sapiens 0 219
ENST00000383597 HLA-E-001 protein_coding Homo_sapiens 0 217
ENST00000383605 HLA-A-001 protein_coding Homo_sapiens 0 207
ENST00000383619 HLA-A-002 protein_coding Homo_sapiens 0 207
ENST00000383621 HLA-G-001 protein_coding Homo_sapiens 0 224
ENST00000383623 HLA-G-004 protein_coding Homo_sapiens 0 224
ENST00000383626 HLA-F-001 protein_coding Homo_sapiens 0 219
ENST00000383627 HLA-F-003 protein_coding Homo_sapiens 0 219
ENST00000400341 HLA-C-001 protein_coding Homo_sapiens 0 207
ENST00000400394 HLA-C-001 protein_coding Homo_sapiens 0 207
ENST00000400395 HLA-C-004 protein_coding Homo_sapiens 0 207
ENST00000400665 HLA-G-002 protein_coding Homo_sapiens 0 224
ENST00000400682 HLA-G-002 protein_coding Homo_sapiens 0 224
ENST00000412263 HLA-G-004 protein_coding Homo_sapiens 0 224
ENST00000412585 HLA-B-001 protein_coding Homo_sapiens 0 191
ENST00000414249 HLA-C-004 protein_coding Homo_sapiens 0 207
ENST00000414592 HLA-A-003 protein_coding Homo_sapiens 0 207
ENST00000415289 HLA-E-001 protein_coding Homo_sapiens 0 217
ENST00000415537 HLA-C-007 protein_coding Homo_sapiens 2e-19 100
ENST00000415649 HLA-E-001 protein_coding Homo_sapiens 0 217
ENST00000416726 HLA-B-006 protein_coding Homo_sapiens 0 196
ENST00000418147 HLA-B-006 protein_coding Homo_sapiens 0 196
ENST00000418780 HLA-K-001 unprocessed_pseudogene Homo_sapiens 0 202
ENST00000419135 HLA-C-003 protein_coding Homo_sapiens 0 213
ENST00000419590 HLA-C-002 protein_coding Homo_sapiens 0 207
ENST00000419856 HLA-W-001 unprocessed_pseudogene Homo_sapiens 2e-28 130
ENST00000420024 HLA-F-006 protein_coding Homo_sapiens 0 219
ENST00000420110 HLA-L-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 196
ENST00000420206 HLA-C-001 protein_coding Homo_sapiens 0 207
ENST00000420559 HLA-G-002 protein_coding Homo_sapiens 0 224
ENST00000420923 HLA-F-006 protein_coding Homo_sapiens 0 219
ENST00000421349 HLA-B-001 protein_coding Homo_sapiens 0 202
ENST00000422371 HLA-G-002 protein_coding Homo_sapiens 0 224
ENST00000422439 HLA-F-001 protein_coding Homo_sapiens 0 219
ENST00000422711 HLA-F-001 protein_coding Homo_sapiens 0 219
ENST00000422726 HLA-C-002 protein_coding Homo_sapiens 0 207
ENST00000422921 HLA-C-004 protein_coding Homo_sapiens 0 207
ENST00000423011 HLA-G-001 protein_coding Homo_sapiens 0 224
ENST00000423373 HLA-G-001 protein_coding Homo_sapiens 0 224
ENST00000423509 HLA-C-003 protein_coding Homo_sapiens 0 207
ENST00000424832 HLA-C-001 protein_coding Homo_sapiens 0 207
ENST00000425603 HLA-E-001 protein_coding Homo_sapiens 0 217
ENST00000425798 HLA-B-006 protein_coding Homo_sapiens 0 196
ENST00000425848 HLA-B-001 protein_coding Homo_sapiens 0 196
ENST00000426675 HLA-F-006 protein_coding Homo_sapiens 0 219
ENST00000426863 HLA-G-004 protein_coding Homo_sapiens 0 224
ENST00000427936 HLA-E-001 protein_coding Homo_sapiens 0 217
ENST00000428296 HLA-F-003 protein_coding Homo_sapiens 0 219
ENST00000428701 HLA-G-201 protein_coding Homo_sapiens 0 224
ENST00000428952 HLA-G-001 protein_coding Homo_sapiens 0 224
ENST00000428988 HLA-K-001 unprocessed_pseudogene Homo_sapiens 0 196
ENST00000429294 HLA-F-006 protein_coding Homo_sapiens 0 213
ENST00000429840 HLA-C-002 protein_coding Homo_sapiens 0 213
ENST00000430151 HLA-K-001 unprocessed_pseudogene Homo_sapiens 0 196
ENST00000430253 HLA-G-005 protein_coding Homo_sapiens 0 224
ENST00000430472 HLA-F-003 protein_coding Homo_sapiens 0 219
ENST00000430940 HLA-C-004 protein_coding Homo_sapiens 0 207
ENST00000431463 HLA-K-001 unprocessed_pseudogene Homo_sapiens 0 202
ENST00000431711 HLA-W-001 unprocessed_pseudogene Homo_sapiens 5e-30 135
ENST00000433153 HLA-C-004 protein_coding Homo_sapiens 0 213
ENST00000433515 HLA-F-006 protein_coding Homo_sapiens 0 219
ENST00000434881 HLA-G-002 protein_coding Homo_sapiens 0 224
ENST00000434884 HLA-C-002 protein_coding Homo_sapiens 0 207
ENST00000434907 HLA-G-004 protein_coding Homo_sapiens 0 224
ENST00000435058 HLA-F-001 protein_coding Homo_sapiens 0 219
ENST00000435618 HLA-B-001 protein_coding Homo_sapiens 0 202
ENST00000435780 HLA-K-001 unprocessed_pseudogene Homo_sapiens 0 189
ENST00000436729 HLA-B-006 protein_coding Homo_sapiens 0 202
ENST00000437265 HLA-B-006 protein_coding Homo_sapiens 0 202
ENST00000437368 HLA-C-007 protein_coding Homo_sapiens 8e-23 111
ENST00000437770 HLA-K-001 unprocessed_pseudogene Homo_sapiens 0 202
ENST00000438171 HLA-C-001 protein_coding Homo_sapiens 0 207
ENST00000439514 HLA-W-001 unprocessed_pseudogene Homo_sapiens 5e-30 135
ENST00000444080 HLA-W-001 unprocessed_pseudogene Homo_sapiens 5e-30 135
ENST00000444098 HLA-G-001 protein_coding Homo_sapiens 0 224
ENST00000444656 HLA-W-001 unprocessed_pseudogene Homo_sapiens 6e-30 135
ENST00000444683 HLA-E-001 protein_coding Homo_sapiens 0 217
ENST00000444891 HLA-F-001 protein_coding Homo_sapiens 0 219
ENST00000445075 HLA-C-007 protein_coding Homo_sapiens 8e-23 111
ENST00000445657 HLA-F-003 protein_coding Homo_sapiens 0 219
ENST00000446351 HLA-W-001 unprocessed_pseudogene Homo_sapiens 5e-30 135
ENST00000448362 HLA-C-007 protein_coding Homo_sapiens 8e-23 111
ENST00000449127 HLA-G-001 protein_coding Homo_sapiens 0 224
ENST00000449884 HLA-C-007 protein_coding Homo_sapiens 8e-23 111
ENST00000450342 HLA-A-003 protein_coding Homo_sapiens 0 207
ENST00000450871 HLA-B-001 protein_coding Homo_sapiens 0 196
ENST00000450984 HLA-G-002 protein_coding Homo_sapiens 0 224
ENST00000451878 HLA-W-001 unprocessed_pseudogene Homo_sapiens 2e-28 130
ENST00000452577 HLA-G-004 protein_coding Homo_sapiens 0 224
ENST00000452715 HLA-G-004 protein_coding Homo_sapiens 0 224
ENST00000453637 HLA-W-001 unprocessed_pseudogene Homo_sapiens 5e-30 135
ENST00000453809 HLA-C-003 protein_coding Homo_sapiens 0 207
ENST00000454033 HLA-C-007 protein_coding Homo_sapiens 8e-23 111
ENST00000454091 HLA-A-001 protein_coding Homo_sapiens 0 207
ENST00000454646 HLA-F-006 protein_coding Homo_sapiens 0 219
ENST00000454779 HLA-F-006 protein_coding Homo_sapiens 0 219
ENST00000455932 HLA-K-001 unprocessed_pseudogene Homo_sapiens 0 202
ENST00000456012 HLA-A-001 protein_coding Homo_sapiens 0 207
ENST00000456487 HLA-C-002 protein_coding Homo_sapiens 0 207
ENST00000457806 HLA-C-007 protein_coding Homo_sapiens 2e-19 100
ENST00000457903 HLA-C-001 protein_coding Homo_sapiens 0 213
ENST00000458192 HLA-C-003 protein_coding Homo_sapiens 0 207
ENST00000458668 HLA-C-002 protein_coding Homo_sapiens 0 207
ENST00000459694 HLA-C-010 retained_intron Homo_sapiens 1.4013e-45 187
ENST00000459768 HLA-G-003 retained_intron Homo_sapiens 0 224
ENST00000460301 HLA-L-002 processed_transcript Homo_sapiens 0 196
ENST00000461285 HLA-C-005 retained_intron Homo_sapiens 0 207
ENST00000461470 HLA-C-005 retained_intron Homo_sapiens 0 207
ENST00000461583 HLA-B-004 nonsense_mediated_decay Homo_sapiens 0 196
ENST00000461937 HLA-C-009 nonsense_mediated_decay Homo_sapiens 0 207
ENST00000461939 HLA-F-011 processed_transcript Homo_sapiens 0 219
ENST00000461996 HLA-A-006 retained_intron Homo_sapiens 0 207
ENST00000462100 HLA-B-005 retained_intron Homo_sapiens 0 196
ENST00000462184 HLA-A-007 retained_intron Homo_sapiens 0 207
ENST00000462536 HLA-A-005 retained_intron Homo_sapiens 0 207
ENST00000462607 HLA-F-011 processed_transcript Homo_sapiens 0 219
ENST00000462851 HLA-C-008 retained_intron Homo_sapiens 0 207
ENST00000462986 HLA-A-007 retained_intron Homo_sapiens 0 207
ENST00000463148 HLA-A-004 retained_intron Homo_sapiens 0 207
ENST00000463348 HLA-L-002 processed_transcript Homo_sapiens 0 196
ENST00000463574 HLA-B-005 retained_intron Homo_sapiens 0 191
ENST00000463832 HLA-B-002 retained_intron Homo_sapiens 2e-39 167
ENST00000464713 HLA-A-005 retained_intron Homo_sapiens 0 207
ENST00000464914 HLA-C-009 nonsense_mediated_decay Homo_sapiens 0 207
ENST00000465114 HLA-F-014 processed_transcript Homo_sapiens 0 219
ENST00000465455 HLA-B-005 retained_intron Homo_sapiens 0 202
ENST00000465459 HLA-F-014 processed_transcript Homo_sapiens 0 213
ENST00000465497 HLA-C-005 retained_intron Homo_sapiens 0 207
ENST00000465778 HLA-F-012 processed_transcript Homo_sapiens 0 219
ENST00000466488 HLA-G-005 nonsense_mediated_decay Homo_sapiens 0 224
ENST00000467814 HLA-G-005 nonsense_mediated_decay Homo_sapiens 0 224
ENST00000467922 HLA-C-008 retained_intron Homo_sapiens 0 213
ENST00000468678 HLA-F-014 processed_transcript Homo_sapiens 0 219
ENST00000469347 HLA-G-005 nonsense_mediated_decay Homo_sapiens 0 224
ENST00000469472 HLA-G-005 nonsense_mediated_decay Homo_sapiens 0 224
ENST00000469544 HLA-C-006 nonsense_mediated_decay Homo_sapiens 0 207
ENST00000469777 HLA-F-011 processed_transcript Homo_sapiens 0 219
ENST00000469883 HLA-B-002 retained_intron Homo_sapiens 1e-37 161
ENST00000470176 HLA-C-008 retained_intron Homo_sapiens 0 207
ENST00000470222 HLA-L-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 196
ENST00000470363 HLA-C-010 retained_intron Homo_sapiens 1.4013e-45 187
ENST00000470780 HLA-A-002 nonsense_mediated_decay Homo_sapiens 0 207
ENST00000470816 HLA-F-008 processed_transcript Homo_sapiens 5e-38 161
ENST00000470915 HLA-B-002 retained_intron Homo_sapiens 1e-37 161
ENST00000471304 HLA-F-008 processed_transcript Homo_sapiens 5e-38 161
ENST00000471639 HLA-B-004 nonsense_mediated_decay Homo_sapiens 0 196
ENST00000471952 HLA-F-014 processed_transcript Homo_sapiens 0 219
ENST00000472371 HLA-F-014 processed_transcript Homo_sapiens 0 219
ENST00000473059 HLA-A-005 retained_intron Homo_sapiens 0 207
ENST00000473718 HLA-F-008 processed_transcript Homo_sapiens 3e-38 161
ENST00000474636 HLA-F-008 processed_transcript Homo_sapiens 5e-38 161
ENST00000474724 HLA-C-010 retained_intron Homo_sapiens 1.4013e-45 187
ENST00000475416 HLA-L-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 193
ENST00000475493 HLA-B-005 retained_intron Homo_sapiens 0 196
ENST00000475567 HLA-L-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 196
ENST00000475902 HLA-B-005 retained_intron Homo_sapiens 0 202
ENST00000476248 HLA-C-006 nonsense_mediated_decay Homo_sapiens 0 207
ENST00000476710 HLA-F-012 processed_transcript Homo_sapiens 0 219
ENST00000476982 HLA-L-002 processed_transcript Homo_sapiens 0 196
ENST00000478108 HLA-G-003 retained_intron Homo_sapiens 0 224
ENST00000478258 HLA-A-006 retained_intron Homo_sapiens 0 207
ENST00000478355 HLA-G-003 retained_intron Homo_sapiens 0 224
ENST00000478519 HLA-G-005 nonsense_mediated_decay Homo_sapiens 0 224
ENST00000478740 HLA-A-004 retained_intron Homo_sapiens 0 207
ENST00000479154 HLA-F-014 processed_transcript Homo_sapiens 0 219
ENST00000479203 HLA-B-004 nonsense_mediated_decay Homo_sapiens 0 196
ENST00000479527 HLA-C-008 retained_intron Homo_sapiens 0 207
ENST00000479546 HLA-C-009 processed_transcript Homo_sapiens 0 213
ENST00000479595 HLA-C-006 nonsense_mediated_decay Homo_sapiens 0 207
ENST00000480429 HLA-C-008 retained_intron Homo_sapiens 0 207
ENST00000480742 HLA-F-012 processed_transcript Homo_sapiens 0 219
ENST00000480953 HLA-G-003 retained_intron Homo_sapiens 0 224
ENST00000481018 HLA-A-006 retained_intron Homo_sapiens 0 207
ENST00000481283 HLA-B-004 nonsense_mediated_decay Homo_sapiens 0 202
ENST00000481588 HLA-C-005 retained_intron Homo_sapiens 0 213
ENST00000482052 HLA-L-003 processed_transcript Homo_sapiens 0 196
ENST00000482187 HLA-L-002 processed_transcript Homo_sapiens 0 196
ENST00000482336 HLA-F-014 processed_transcript Homo_sapiens 0 219
ENST00000482589 HLA-L-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 196
ENST00000483860 HLA-F-012 processed_transcript Homo_sapiens 0 219
ENST00000484704 HLA-F-012 processed_transcript Homo_sapiens 0 213
ENST00000484755 HLA-G-003 retained_intron Homo_sapiens 0 224
ENST00000485321 HLA-C-006 nonsense_mediated_decay Homo_sapiens 0 207
ENST00000485463 HLA-F-008 processed_transcript Homo_sapiens 5e-38 161
ENST00000485513 HLA-F-011 processed_transcript Homo_sapiens 0 213
ENST00000486553 HLA-G-005 nonsense_mediated_decay Homo_sapiens 0 224
ENST00000486729 HLA-C-010 retained_intron Homo_sapiens 1.4013e-45 187
ENST00000487245 HLA-C-005 retained_intron Homo_sapiens 0 207
ENST00000488237 HLA-F-012 processed_transcript Homo_sapiens 0 219
ENST00000488273 HLA-C-006 nonsense_mediated_decay Homo_sapiens 0 207
ENST00000488889 HLA-A-002 processed_transcript Homo_sapiens 0 207
ENST00000489502 HLA-F-008 processed_transcript Homo_sapiens 2e-36 156
ENST00000489762 HLA-B-002 retained_intron Homo_sapiens 2e-39 167
ENST00000489795 HLA-F-012 processed_transcript Homo_sapiens 0 219
ENST00000490304 HLA-F-011 processed_transcript Homo_sapiens 0 219
ENST00000490333 HLA-F-008 processed_transcript Homo_sapiens 5e-38 161
ENST00000490676 HLA-B-005 retained_intron Homo_sapiens 0 196
ENST00000490960 HLA-C-010 retained_intron Homo_sapiens 0 193
ENST00000491141 HLA-G-003 retained_intron Homo_sapiens 0 224
ENST00000491405 HLA-L-002 processed_transcript Homo_sapiens 0 193
ENST00000491984 HLA-C-006 nonsense_mediated_decay Homo_sapiens 0 213
ENST00000492107 HLA-A-007 retained_intron Homo_sapiens 0 207
ENST00000492699 HLA-L-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 196
ENST00000492759 HLA-A-004 retained_intron Homo_sapiens 0 207
ENST00000493512 HLA-B-002 retained_intron Homo_sapiens 1e-37 161
ENST00000494158 HLA-C-010 retained_intron Homo_sapiens 1.4013e-45 187
ENST00000494169 HLA-F-011 processed_transcript Homo_sapiens 0 219
ENST00000494247 HLA-G-003 retained_intron Homo_sapiens 0 224
ENST00000494823 HLA-C-008 retained_intron Homo_sapiens 0 207
ENST00000494871 HLA-C-009 processed_transcript Homo_sapiens 0 207
ENST00000494940 HLA-F-011 processed_transcript Homo_sapiens 0 219
ENST00000495635 HLA-C-005 retained_intron Homo_sapiens 0 207
ENST00000495725 HLA-C-009 processed_transcript Homo_sapiens 0 207
ENST00000495835 HLA-C-008 retained_intron Homo_sapiens 0 207
ENST00000495898 HLA-C-009 processed_transcript Homo_sapiens 0 207
ENST00000496419 HLA-C-005 retained_intron Homo_sapiens 0 207
ENST00000497494 HLA-L-002 processed_transcript Homo_sapiens 0 196
ENST00000498007 HLA-B-002 retained_intron Homo_sapiens 5e-36 156
ENST00000498011 HLA-C-010 retained_intron Homo_sapiens 1.4013e-45 187
ENST00000498484 HLA-B-004 nonsense_mediated_decay Homo_sapiens 0 202
ENST00000546545 HLA-G-203 protein_coding Homo_sapiens 0 224
ENST00000546634 HLA-G-205 protein_coding Homo_sapiens 0 224
ENST00000547241 HLA-G-204 protein_coding Homo_sapiens 0 224
ENST00000547931 HLA-G-207 protein_coding Homo_sapiens 0 224
ENST00000549224 HLA-A-203 protein_coding Homo_sapiens 0 207
ENST00000549422 HLA-F-204 protein_coding Homo_sapiens 0 219
ENST00000550728 HLA-A-213 protein_coding Homo_sapiens 0 207
ENST00000550897 HLA-G-206 protein_coding Homo_sapiens 0 224
ENST00000550932 HLA-F-203 protein_coding Homo_sapiens 0 219
ENST00000551780 HLA-F-209 protein_coding Homo_sapiens 0 219
ENST00000551832 HLA-F-208 protein_coding Homo_sapiens 0 219
ENST00000552082 HLA-F-201 protein_coding Homo_sapiens 0 219
ENST00000552493 HLA-A-205 protein_coding Homo_sapiens 0 207
ENST00000553052 HLA-G-202 protein_coding Homo_sapiens 0 224
ENST00000606273 HLA-F-015 processed_transcript Homo_sapiens 0 213
ENST00000612360 HLA-G-004 protein_coding Homo_sapiens 0 219
ENST00000612468 HLA-E-201 protein_coding Homo_sapiens 0 217
ENST00000612643 HLA-E-207 protein_coding Homo_sapiens 0 217
ENST00000612644 HLA-A-206 protein_coding Homo_sapiens 0 207
ENST00000615098 HLA-G-001 protein_coding Homo_sapiens 0 219
ENST00000615464 HLA-G-002 protein_coding Homo_sapiens 0 219
ENST00000615789 HLA-G-003 retained_intron Homo_sapiens 0 219
ENST00000616124 HLA-E-202 protein_coding Homo_sapiens 0 217
ENST00000616730 HLA-A-204 protein_coding Homo_sapiens 0 207
ENST00000617604 HLA-F-206 protein_coding Homo_sapiens 0 219
ENST00000617749 HLA-E-205 protein_coding Homo_sapiens 0 217
ENST00000618039 HLA-G-005 nonsense_mediated_decay Homo_sapiens 0 219
ENST00000618812 HLA-G-208 protein_coding Homo_sapiens 0 219
ENST00000618827 HLA-E-206 protein_coding Homo_sapiens 0 217
ENST00000620537 HLA-E-203 protein_coding Homo_sapiens 0 217
ENST00000620806 HLA-C-201 protein_coding Homo_sapiens 0 207
ENST00000621113 HLA-E-204 protein_coding Homo_sapiens 0 217
ENST00000622145 HLA-F-207 protein_coding Homo_sapiens 0 219

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