C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L7a pseudogene 26
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000488538 RPL7AP26-001 ENSG00000214988 9606 - 4:82490823-82491635 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverOvaryPlacentaTestisENST00000488538
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Ovary Placenta Testis
ENST00000488538 0.021±0.00 0.022±0.00 0.364±0.00 0.023±0.00 0.021±0.00 0.036±0.01 0.045±0.00 0.061±0.00 0.268±0.21 0.088±0.02 0.087±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00052X CIL_00052X_0002 CGP 4:82430562-82562357

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000085365 Gm16477-001 processed_pseudogene Mus_musculus 0 743
ENSMUST00000118791 Rpl7a-ps11-001 processed_pseudogene Mus_musculus 0 737
ENSMUST00000090170 Rpl7a-ps3-201 protein_coding Mus_musculus 0 737
ENSMUST00000190511 RP23-58N8.1-001 processed_pseudogene Mus_musculus 0 732
ENSMUST00000102898 Rpl7a-001 protein_coding Mus_musculus 0 726
ENSMUST00000183380 Gm17828-001 processed_pseudogene Mus_musculus 0 725
ENSMUST00000190579 Rpl7a-ps10-001 processed_pseudogene Mus_musculus 0 704
ENSMUST00000096427 Gm17415-001 processed_pseudogene Mus_musculus 0 704
ENSMUST00000191231 RP24-217I2.2-001 processed_pseudogene Mus_musculus 0 697
ENSMUST00000095218 Rpl7a-ps5-201 protein_coding Mus_musculus 0 693
ENSMUST00000071172 RP23-58N8.4-001 processed_pseudogene Mus_musculus 0 686
ENSMUST00000145247 Gm6286-001 processed_pseudogene Mus_musculus 0 682
ENSMUST00000162120 Gm7418-001 processed_pseudogene Mus_musculus 0 654
ENSMUST00000122355 Gm11760-001 processed_pseudogene Mus_musculus 0 652
ENSMUST00000119745 Gm13864-001 processed_pseudogene Mus_musculus 0 651
ENSMUST00000120032 Gm13666-001 processed_pseudogene Mus_musculus 0 636
ENSMUST00000117398 Gm8250-001 processed_pseudogene Mus_musculus 0 634
ENSMUST00000120384 Rpl7a-ps12-001 processed_pseudogene Mus_musculus 0 623
ENSMUST00000171235 Gm5459-001 processed_pseudogene Mus_musculus 0 621
ENSMUST00000151645 Gm7847-001 processed_pseudogene Mus_musculus 0 616
ENSMUST00000136269 Rpl7a-002 processed_transcript Mus_musculus 0 597
ENSMUST00000117439 Gm12385-001 processed_pseudogene Mus_musculus 0 580
ENSMUST00000137376 Rpl7a-004 processed_transcript Mus_musculus 0 551
ENSMUST00000120504 Gm12124-001 processed_pseudogene Mus_musculus 0 532
ENSMUST00000118838 Gm11362-001 processed_pseudogene Mus_musculus 0 503
ENSMUST00000118582 Gm14082-001 processed_pseudogene Mus_musculus 0 416
ENSMUST00000120981 Gm12593-001 processed_pseudogene Mus_musculus 0 407
ENSMUST00000143678 Rpl7a-003 processed_transcript Mus_musculus 0 357
ENSMUST00000166414 Gm17097-001 processed_pseudogene Mus_musculus 8e-38 161
ENSMUST00000184119 Gm27189-001 processed_pseudogene Mus_musculus 2e-19 100
ENSMUST00000119982 Gm15007-001 processed_pseudogene Mus_musculus 0.0000000000009 79

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