C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L21 pseudogene 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000497954 RPL21P4-001 ENSG00000240828 9606 + 17:43079302-43079780 processed_pseudogene

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00061F CIL_00061F_0001 CGP 17:43025241-43125483
CIL_00040M CIL_00040M_0001 CGP 17:43044295-43211689

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000099272 Rpl21-003 protein_coding Mus_musculus 0 529
ENSMUST00000075453 Rpl21-002 protein_coding Mus_musculus 0 529
ENSMUST00000035983 Rpl21-001 protein_coding Mus_musculus 0 529
ENSMUST00000121545 Rpl21-ps15-001 processed_pseudogene Mus_musculus 0 518
ENSMUST00000119328 Gm14648-001 processed_pseudogene Mus_musculus 0 518
ENSMUST00000121309 Gm13370-001 processed_pseudogene Mus_musculus 0 518
ENSMUST00000089785 Gm10240-001 processed_pseudogene Mus_musculus 0 518
ENSMUST00000118352 Gm11703-001 processed_pseudogene Mus_musculus 0 518
ENSMUST00000160079 Gm3355-001 processed_pseudogene Mus_musculus 0 516
ENSMUST00000155008 Gm10163-001 processed_pseudogene Mus_musculus 0 516
ENSMUST00000084598 Gm10155-201 processed_pseudogene Mus_musculus 0 512
ENSMUST00000119140 Gm12411-001 processed_pseudogene Mus_musculus 0 507
ENSMUST00000076314 Gm5528-001 processed_pseudogene Mus_musculus 0 505
ENSMUST00000121563 Gm15682-001 processed_pseudogene Mus_musculus 0 501
ENSMUST00000178657 Gm10045-001 processed_pseudogene Mus_musculus 0 496
ENSMUST00000122260 Gm13653-001 processed_pseudogene Mus_musculus 0 490
ENSMUST00000080330 Gm10916-201 processed_pseudogene Mus_musculus 0 479
ENSMUST00000077420 Rpl21-ps7-201 processed_pseudogene Mus_musculus 0 479
ENSMUST00000095940 Rpl21-ps5-201 processed_pseudogene Mus_musculus 0 479
ENSMUST00000119542 Gm15921-001 processed_pseudogene Mus_musculus 0 479
ENSMUST00000093411 Gm8054-201 processed_pseudogene Mus_musculus 0 477
ENSMUST00000119332 Gm13604-001 processed_pseudogene Mus_musculus 0 475
ENSMUST00000153140 Gm16060-001 processed_pseudogene Mus_musculus 0 473
ENSMUST00000081668 Rpl21-ps12-201 processed_pseudogene Mus_musculus 0 473
ENSMUST00000117491 Gm14336-001 processed_pseudogene Mus_musculus 0 472
ENSMUST00000117993 Gm13641-001 processed_pseudogene Mus_musculus 0 472
ENSMUST00000180049 Gm6919-001 processed_pseudogene Mus_musculus 0 468
ENSMUST00000179660 Gm16416-201 processed_pseudogene Mus_musculus 0 468
ENSMUST00000118772 Gm11975-001 processed_pseudogene Mus_musculus 0 466
ENSMUST00000117861 Gm12760-001 processed_pseudogene Mus_musculus 0 462
ENSMUST00000120607 Gm13525-001 processed_pseudogene Mus_musculus 0 451
ENSMUST00000121800 Gm8880-001 processed_pseudogene Mus_musculus 0 451
ENSMUST00000077278 Rpl21-ps11-201 processed_pseudogene Mus_musculus 0 449
ENSMUST00000130905 Gm6689-001 processed_pseudogene Mus_musculus 0 444
ENSMUST00000121662 Gm14053-001 processed_pseudogene Mus_musculus 0 427
ENSMUST00000119262 Gm12944-001 processed_pseudogene Mus_musculus 0 377
ENSMUST00000122454 Gm8840-001 processed_pseudogene Mus_musculus 0 370
ENSMUST00000080237 Rpl21-ps4-201 protein_coding Mus_musculus 0 333
ENSMUST00000121644 Gm15309-001 processed_pseudogene Mus_musculus 0 244
ENSMUST00000118827 Gm15312-001 processed_pseudogene Mus_musculus 0 244
ENSMUST00000117461 Gm14657-001 processed_pseudogene Mus_musculus 0 244
ENSDART00000002595 rpl21-001 protein_coding Danio_rerio 0 224
ENSMUST00000185232 RP23-478I8.1-001 processed_pseudogene Mus_musculus 0 206
ENSMUST00000151871 Rpl21-005 retained_intron Mus_musculus 6.00036e-42 174
ENSMUST00000120018 Gm13518-001 processed_pseudogene Mus_musculus 1e-39 167
ENSMUST00000119221 Gm12934-001 processed_pseudogene Mus_musculus 3e-30 135
ENSMUST00000154768 Rpl21-004 retained_intron Mus_musculus 8e-21 104

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