C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000510061 AC006445.7-001 ENSG00000249148 9606 - 4:13631820-13632599 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartKidneyLiverMuscleOvaryTestisENST00000510061
Transcript ID Adipose Adrenal Brain Breast Heart Kidney Liver Muscle Ovary Testis
ENST00000510061 0.167±0.00 0.406±0.00 0.116±0.00 0.029±0.00 0.201±0.12 0.086±0.00 0.077±0.00 0.103±0.00 0.157±0.09 0.154±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00097J CIL_00097J_0001 VISTA 4:13215873-13817543

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000099272 Rpl21-003 protein_coding Mus_musculus 0 424
ENSMUST00000075453 Rpl21-002 protein_coding Mus_musculus 0 424
ENSMUST00000035983 Rpl21-001 protein_coding Mus_musculus 0 424
ENSMUST00000093411 Gm8054-201 processed_pseudogene Mus_musculus 0 416
ENSMUST00000160079 Gm3355-001 processed_pseudogene Mus_musculus 0 412
ENSMUST00000121545 Rpl21-ps15-001 processed_pseudogene Mus_musculus 0 411
ENSMUST00000119140 Gm12411-001 processed_pseudogene Mus_musculus 0 411
ENSMUST00000119328 Gm14648-001 processed_pseudogene Mus_musculus 0 411
ENSMUST00000155008 Gm10163-001 processed_pseudogene Mus_musculus 0 411
ENSMUST00000121309 Gm13370-001 processed_pseudogene Mus_musculus 0 411
ENSMUST00000089785 Gm10240-001 processed_pseudogene Mus_musculus 0 411
ENSMUST00000118352 Gm11703-001 processed_pseudogene Mus_musculus 0 411
ENSMUST00000119332 Gm13604-001 processed_pseudogene Mus_musculus 0 407
ENSMUST00000121563 Gm15682-001 processed_pseudogene Mus_musculus 0 405
ENSMUST00000080279 Rpl21-ps14-201 processed_pseudogene Mus_musculus 0 399
ENSMUST00000130005 Rpl21-ps8-001 processed_pseudogene Mus_musculus 0 398
ENSMUST00000084598 Gm10155-201 processed_pseudogene Mus_musculus 0 394
ENSMUST00000119542 Gm15921-001 processed_pseudogene Mus_musculus 0 394
ENSMUST00000178657 Gm10045-001 processed_pseudogene Mus_musculus 0 388
ENSMUST00000180049 Gm6919-001 processed_pseudogene Mus_musculus 0 388
ENSMUST00000076314 Gm5528-001 processed_pseudogene Mus_musculus 0 388
ENSMUST00000122260 Gm13653-001 processed_pseudogene Mus_musculus 0 383
ENSMUST00000095268 Gm9104-001 processed_pseudogene Mus_musculus 0 377
ENSMUST00000179660 Gm16416-201 processed_pseudogene Mus_musculus 0 377
ENSMUST00000117861 Gm12760-001 processed_pseudogene Mus_musculus 0 375
ENSMUST00000117491 Gm14336-001 processed_pseudogene Mus_musculus 0 375
ENSMUST00000077420 Rpl21-ps7-201 processed_pseudogene Mus_musculus 0 372
ENSMUST00000095940 Rpl21-ps5-201 processed_pseudogene Mus_musculus 0 372
ENSMUST00000153140 Gm16060-001 processed_pseudogene Mus_musculus 0 370
ENSMUST00000080330 Gm10916-201 processed_pseudogene Mus_musculus 0 366
ENSMUST00000081668 Rpl21-ps12-201 processed_pseudogene Mus_musculus 0 366
ENSMUST00000117993 Gm13641-001 processed_pseudogene Mus_musculus 0 363
ENSMUST00000121800 Gm8880-001 processed_pseudogene Mus_musculus 0 357
ENSMUST00000120607 Gm13525-001 processed_pseudogene Mus_musculus 0 346
ENSMUST00000118772 Gm11975-001 processed_pseudogene Mus_musculus 0 337
ENSMUST00000130905 Gm6689-001 processed_pseudogene Mus_musculus 0 335
ENSMUST00000119242 Gm14115-001 processed_pseudogene Mus_musculus 0 333
ENSMUST00000120315 Gm9378-001 processed_pseudogene Mus_musculus 0 315
ENSMUST00000122454 Gm8840-001 processed_pseudogene Mus_musculus 0 285
ENSMUST00000119262 Gm12944-001 processed_pseudogene Mus_musculus 0 270
ENSMUST00000080237 Rpl21-ps4-201 protein_coding Mus_musculus 0 270
ENSMUST00000118827 Gm15312-001 processed_pseudogene Mus_musculus 0 222
ENSMUST00000121644 Gm15309-001 processed_pseudogene Mus_musculus 0 220
ENSMUST00000185232 RP23-478I8.1-001 processed_pseudogene Mus_musculus 0 195
ENSMUST00000117461 Gm14657-001 processed_pseudogene Mus_musculus 0 193
ENSMUST00000151871 Rpl21-005 retained_intron Mus_musculus 3e-40 169
ENSMUST00000120018 Gm13518-001 processed_pseudogene Mus_musculus 8e-36 154
ENSMUST00000119221 Gm12934-001 processed_pseudogene Mus_musculus 2e-26 122
ENSMUST00000154768 Rpl21-004 retained_intron Mus_musculus 1e-19 100

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