C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000530225 RPS2-017 ENSG00000140988 9606 - 16:1962061-1964631 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0003735 IEA structural constituent of ribosome
GO:0005840 IEA ribosome
GO:0006412 IEA translation
GO:0015935 IEA small ribosomal subunit

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000146867 Rps2-002 protein_coding Mus_musculus 0 625
ENSMUST00000054289 Rps2-001 protein_coding Mus_musculus 0 625
ENSDART00000110842 rps2-201 protein_coding Danio_rerio 0 427
ENSDART00000138107 rps2-001 protein_coding Danio_rerio 0 427
ENSMUST00000119247 Gm15653-001 processed_pseudogene Mus_musculus 0 416
ENSMUST00000129984 Rps2-007 retained_intron Mus_musculus 0 399
ENSMUST00000170335 Rps2-ps10-002 processed_transcript Mus_musculus 0 250
ENSDART00000141100 rps2-002 protein_coding Danio_rerio 0 244
ENSMUST00000117512 Gm7222-001 processed_pseudogene Mus_musculus 0 233
ENSMUST00000177599 Gm5070-001 processed_pseudogene Mus_musculus 0 222
ENSMUST00000118911 Gm11687-001 processed_pseudogene Mus_musculus 0 220
ENSMUST00000117071 Gm11249-001 processed_pseudogene Mus_musculus 0 215
ENSMUST00000117295 Rps2-ps13-001 processed_pseudogene Mus_musculus 0 215
ENSMUST00000121722 Gm12366-001 processed_pseudogene Mus_musculus 0 215
ENSMUST00000184266 Rps2-ps5-001 processed_pseudogene Mus_musculus 0 215
ENSMUST00000079261 Gm6139-001 processed_pseudogene Mus_musculus 0 215
ENSMUST00000073790 Gm6311-201 pseudogene Mus_musculus 0 215
ENSMUST00000095471 Rps2-ps6-201 protein_coding Mus_musculus 0 215
ENSMUST00000166546 Gm18025-201 protein_coding Mus_musculus 0 215
ENSMUST00000076842 Rps2-ps10-001 transcribed_processed_pseudogene Mus_musculus 0 211
ENSMUST00000169678 Gm6576-201 protein_coding Mus_musculus 0 209
ENSMUST00000075898 Gm5921-001 processed_pseudogene Mus_musculus 0 204
ENSMUST00000071458 Gm4968-001 processed_pseudogene Mus_musculus 0 204
ENSMUST00000122167 Gm16061-001 processed_pseudogene Mus_musculus 0 204
ENSMUST00000085368 Gm5786-201 protein_coding Mus_musculus 0 204
ENSMUST00000165577 Gm17150-001 processed_pseudogene Mus_musculus 0 200
ENSMUST00000118634 Gm6433-001 processed_pseudogene Mus_musculus 0 198
ENSMUST00000118720 Gm11599-001 processed_pseudogene Mus_musculus 0 195
ENSDART00000133878 rps2-003 retained_intron Danio_rerio 2e-38 163
ENSMUST00000146791 Gm12091-001 processed_pseudogene Mus_musculus 8e-38 161
ENSMUST00000122465 Gm12152-001 processed_pseudogene Mus_musculus 3e-37 159
ENSMUST00000152407 Rps2-003 protein_coding Mus_musculus 0 621
ENSMUST00000122809 Rps2-004 retained_intron Mus_musculus 2e-34 150
ENSMUST00000170715 Rps2-201 protein_coding Mus_musculus 0 621

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