C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 8 pseudogene 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000533003 KRT8P7-001 ENSG00000230716 9606 - 11:119602875-119604306 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonKidneyLiverOvaryPlacentaTestisENST00000533003
Transcript ID Brain Breast Colon Kidney Liver Ovary Placenta Testis
ENST00000533003 0.072±0.00 0.018±0.00 0.016±0.00 0.034±0.00 0.030±0.00 0.080±0.04 0.057±0.00 0.071±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099Y CIL_00099Y_0001 VISTA 11:119589021-120192949

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023952 Krt8-201 protein_coding Mus_musculus 0 1358
ENSMUST00000023714 4732456N10Rik-001 protein_coding Mus_musculus 0 501
ENSMUST00000023709 Krt5-001 protein_coding Mus_musculus 0 433
ENSMUST00000068904 Krt7-001 protein_coding Mus_musculus 0 396
ENSMUST00000023788 Krt6a-201 protein_coding Mus_musculus 0 309
ENSMUST00000100179 Krt76-001 protein_coding Mus_musculus 0 307
ENSMUST00000023786 Krt6b-201 protein_coding Mus_musculus 0 292
ENSMUST00000042957 Krt75-001 protein_coding Mus_musculus 0 276
ENSMUST00000023799 Krt79-001 protein_coding Mus_musculus 0 252
ENSMUST00000023797 Krt4-201 protein_coding Mus_musculus 0 248
ENSMUST00000100184 Gm5478-201 protein_coding Mus_musculus 3e-34 150
ENSMUST00000023720 Krt84-201 protein_coding Mus_musculus 1e-33 148
ENSMUST00000087996 Krt77-001 protein_coding Mus_musculus 1e-32 145
ENSMUST00000147662 Krt7-003 protein_coding Mus_musculus 5e-32 143
ENSMUST00000131069 Krt7-002 retained_intron Mus_musculus 7e-31 139
ENSMUST00000148248 Vim-004 retained_intron Mus_musculus 2e-17 95
ENSMUST00000028062 Vim-001 protein_coding Mus_musculus 2e-17 95

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