C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007JO_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
HNRNPD UCNEbase 9606 4:82354680-82425790
GeneTranscriptPositionBiotype
ENSG00000138668 (HNRNPD)
heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) 		ENST00000313899 (HNRNPD-001) 82352498-82373956 protein_coding
ENST00000352301 (HNRNPD-003) 82353834-82373983 protein_coding
ENST00000353341 (HNRNPD-002) 82353829-82373986 protein_coding
ENST00000503822 (HNRNPD-007) 82358758-82374161 protein_coding
ENST00000507010 (HNRNPD-008) 82357403-82374144 protein_coding
ENST00000508119 (HNRNPD-012) 82354847-82357392 processed_transcript
ENST00000509107 (HNRNPD-009) 82359516-82373985 protein_coding
ENST00000509263 (HNRNPD-011) 82356554-82373150 protein_coding
ENST00000513584 (HNRNPD-004) 82355249-82373991 nonsense_mediated_decay
ENST00000514325 (HNRNPD-006) 82353829-82358842 retained_intron
ENST00000514671 (HNRNPD-005) 82353834-82359639 nonsense_mediated_decay
ENST00000515432 (HNRNPD-010) 82357437-82374503 protein_coding
ENSG00000152795 (HNRNPDL)
heterogeneous nuclear ribonucleoprotein D-like 		ENST00000295470 (HNRNPDL-001) 82422564-82429866 protein_coding
ENST00000349655 (HNRNPDL-005) 82424629-82429447 nonsense_mediated_decay
ENST00000502762 (HNRNPDL-002) 82424629-82430225 nonsense_mediated_decay
ENST00000507721 (HNRNPDL-004) 82424625-82429397 protein_coding
ENST00000514511 (HNRNPDL-003) 82425583-82429425 nonsense_mediated_decay
ENST00000602300 (HNRNPDL-006) 82424629-82429441 protein_coding
ENST00000614627 (HNRNPDL-201) 82422565-82430225 protein_coding
ENST00000621267 (HNRNPDL-202) 82422565-82430225 protein_coding
ENSG00000250325 (IGBP1P4)
immunoglobulin (CD79A) binding protein 1 pseudogene 4 		ENST00000503202 (IGBP1P4-001) 82401578-82402456 processed_pseudogene
CIL_0007JO_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
HNRNPD UCNEbase 10090 5:99961884-100035864
GeneTranscriptPositionBiotype
ENSMUSG00000000568 (Hnrnpd)
heterogeneous nuclear ribonucleoprotein D 		ENSMUST00000019128 (Hnrnpd-002) 99960598-99978937 protein_coding
ENSMUST00000072750 (Hnrnpd-005) 99961002-99978935 protein_coding
ENSMUST00000112939 (Hnrnpd-003) 99960998-99978917 protein_coding
ENSMUST00000164833 (Hnrnpd-012) 99961168-99964750 nonsense_mediated_decay
ENSMUST00000167035 (Hnrnpd-011) 99962301-99964007 protein_coding
ENSMUST00000168396 (Hnrnpd-004) 99962283-99978624 nonsense_mediated_decay
ENSMUST00000170654 (Hnrnpd-009) 99964743-99966387 retained_intron
ENSMUST00000170912 (Hnrnpd-008) 99967308-99978859 processed_transcript
ENSMUST00000171106 (Hnrnpd-006) 99961003-99976551 nonsense_mediated_decay
ENSMUST00000171640 (Hnrnpd-010) 99961151-99966174 nonsense_mediated_decay
ENSMUST00000171786 (Hnrnpd-007) 99966027-99978934 protein_coding
ENSMUST00000172361 (Hnrnpd-001) 99958426-99978938 protein_coding
ENSMUSG00000029328 (Hnrnpdl)
heterogeneous nuclear ribonucleoprotein D-like 		ENSMUST00000086900 (Hnrnpdl-003) 100034727-100039664 nonsense_mediated_decay
ENSMUST00000128187 (Hnrnpdl-001) 100033577-100039222 protein_coding
ENSMUST00000135424 (Hnrnpdl-007) 100033577-100036068 processed_transcript
ENSMUST00000141337 (Hnrnpdl-006) 100034828-100036725 retained_intron
ENSMUST00000149384 (Hnrnpdl-002) 100035426-100038895 nonsense_mediated_decay
ENSMUST00000151323 (Hnrnpdl-005) 100035960-100037123 retained_intron
ENSMUST00000153442 (Hnrnpdl-004) 100034721-100038869 protein_coding
ENSMUSG00000035364 (4930524J08Rik)
RIKEN cDNA 4930524J08 gene 		ENSMUST00000046721 (4930524J08Rik-201) 99979061-99979663 protein_coding
ENSMUSG00000091623 (Gm17092)
predicted gene 17092 		ENSMUST00000166606 (Gm17092-001) 99977686-99978858 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007JO_0001ENSG00000138668ENST00000313899ENST00000352301ENST00000353341ENST00000503822ENST00000507010ENST00000508119ENST00000509107ENST00000509263ENST00000513584ENST00000514325ENST00000514671ENST00000515432ENSG00000152795ENST00000295470ENST00000349655ENST00000502762ENST00000507721ENST00000514511ENST00000602300ENST00000614627ENST00000621267ENSG00000250325ENST00000503202CIL_0007JO_0002ENSMUSG00000000568ENSMUST00000019128ENSMUST00000072750ENSMUST00000112939ENSMUST00000164833ENSMUST00000167035ENSMUST00000168396ENSMUST00000170654ENSMUST00000170912ENSMUST00000171106ENSMUST00000171640ENSMUST00000171786ENSMUST00000172361ENSMUSG00000029328ENSMUST00000086900ENSMUST00000128187ENSMUST00000135424ENSMUST00000141337ENSMUST00000149384ENSMUST00000151323ENSMUST00000153442ENSMUSG00000035364ENSMUST00000046721ENSMUSG00000091623ENSMUST00000166606
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007JO_0001ENSG00000138668ENST00000313899ENST00000352301ENST00000353341ENST00000509107ENST00000509263ENST00000513584ENST00000514325ENST00000514671ENSG00000152795ENST00000295470ENST00000349655ENST00000507721ENST00000514511ENST00000602300ENST00000621267ENSG00000250325ENST00000503202CIL_0007JO_0002ENSMUSG00000000568ENSMUST00000019128ENSMUST00000072750ENSMUST00000112939ENSMUST00000164833ENSMUST00000170912ENSMUST00000171106ENSMUST00000171640ENSMUST00000171786ENSMUST00000172361ENSMUSG00000029328ENSMUST00000086900ENSMUST00000128187ENSMUST00000135424ENSMUST00000141337ENSMUST00000149384ENSMUST00000153442ENSMUSG00000035364ENSMUST00000046721ENSMUSG00000091623ENSMUST00000166606
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000138668 ENST00000313899 N/A N/A N/A 8.154±0.00 N/A N/A N/A N/A N/A 1.672±0.00 3.481±0.00 5.502±3.88 N/A N/A
ENST00000352301 71.173±0.00 62.535±0.00 N/A 37.346±0.00 34.028±0.00 47.447±0.00 9.764±8.96 17.106±0.00 13.182±0.00 37.200±0.00 8.978±7.19 68.337±21.21 44.154±4.58 59.885±0.00
ENST00000353341 95.507±0.00 96.553±0.00 4.503±0.00 28.696±26.66 38.794±32.30 40.003±33.47 14.828±13.55 28.267±24.40 13.742±9.75 25.221±0.00 17.864±0.00 92.207±59.10 79.219±19.28 74.647±8.22
ENST00000503822 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507010 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508119 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509107 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 189.281±0.00 N/A
ENST00000509263 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 168.053±0.00 148.153±0.00 89.687±0.00
ENST00000513584 N/A N/A N/A N/A N/A N/A N/A 21.177±0.00 N/A N/A N/A N/A N/A N/A
ENST00000514325 N/A N/A N/A N/A 2.376±0.00 2.960±0.00 N/A N/A N/A N/A N/A 1.444±0.00 N/A N/A
ENST00000514671 N/A N/A N/A 2.109±0.00 N/A N/A 1.278±0.00 4.429±0.00 9.345±0.00 19.377±0.00 5.991±4.13 6.075±0.00 N/A N/A
ENST00000515432 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000152795 ENST00000295470 N/A N/A 2.289±0.00 6.036±1.10 N/A N/A 1.689±0.00 7.660±0.00 7.748±0.00 4.205±0.00 0.884±0.00 17.293±3.37 10.603±7.82 N/A
ENST00000349655 N/A N/A N/A N/A 5.345±0.00 5.935±0.00 2.861±0.00 N/A N/A 16.472±0.00 11.256±7.67 19.930±0.00 10.055±0.00 N/A
ENST00000502762 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507721 6.126±0.00 13.787±0.00 1.930±0.00 8.793±1.99 6.553±1.76 4.021±0.84 7.785±0.00 17.711±0.00 7.079±0.00 13.440±5.20 1.450±0.00 24.370±0.00 5.381±1.08 N/A
ENST00000514511 N/A N/A 7.150±0.00 10.429±0.00 5.401±0.00 7.866±0.00 N/A 6.442±0.00 N/A N/A N/A N/A N/A N/A
ENST00000602300 60.322±0.00 156.162±0.00 11.304±0.00 67.561±28.49 28.634±15.10 18.147±5.49 29.640±18.70 20.748±13.92 27.528±2.80 45.229±13.87 22.080±15.26 87.249±30.77 54.454±23.49 152.128±9.00
ENST00000614627 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000621267 6.007±0.00 14.745±0.00 N/A 10.026±0.00 5.018±0.00 N/A N/A N/A 2.610±0.00 6.193±0.00 N/A 22.575±0.00 4.179±0.00 N/A
ENSG00000250325 ENST00000503202 N/A 0.017±0.00 N/A 0.034±0.00 N/A 0.169±0.15 N/A N/A N/A N/A 0.029±0.00 0.037±0.00 0.021±0.00 0.250±0.10
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000000568 ENSMUST00000019128 N/A N/A N/A 25.860±2.90 N/A N/A N/A 2.075±0.14 16.295±4.92 N/A N/A N/A 12.353±1.02 2.422±0.00
ENSMUST00000072750 N/A N/A N/A N/A N/A N/A N/A N/A 40.937±26.84 N/A 4.326±0.72 N/A 22.012±2.77 N/A
ENSMUST00000112939 1.539±0.00 N/A 23.331±1.09 33.273±12.22 3.771±1.68 N/A 3.226±0.51 3.642±0.35 29.340±7.69 5.591±0.00 4.868±0.70 28.566±11.86 38.914±24.92 9.429±5.75
ENSMUST00000164833 N/A N/A N/A N/A N/A N/A N/A 5.385±0.00 3.807±0.00 N/A N/A 29.869±0.00 54.158±0.00 34.892±28.41
ENSMUST00000167035 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168396 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170654 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170912 N/A N/A N/A N/A 9.302±0.67 14.938±2.71 N/A 9.926±0.00 N/A 12.245±0.00 N/A 20.508±4.80 N/A N/A
ENSMUST00000171106 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 22.909±0.62 N/A N/A
ENSMUST00000171640 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 36.083±1.78 55.446±21.33 21.181±0.00
ENSMUST00000171786 N/A N/A N/A 182.107±0.00 N/A N/A N/A N/A N/A N/A 17.433±3.21 145.699±60.39 281.415±248.06 93.486±0.00
ENSMUST00000172361 N/A N/A N/A 5.950±0.00 N/A N/A N/A N/A N/A 2.645±0.10 1.851±0.04 N/A N/A 1.227±0.05
ENSMUSG00000029328 ENSMUST00000086900 9.943±5.56 9.621±1.18 N/A 32.859±9.09 7.919±1.49 9.351±4.71 N/A 3.110±0.60 17.665±8.56 6.271±0.54 8.512±0.63 14.789±3.47 61.564±72.03 12.163±15.65
ENSMUST00000128187 2.581±0.00 N/A 24.077±2.94 36.091±11.80 5.541±0.06 N/A 10.410±0.79 3.884±0.94 23.371±12.59 6.987±1.61 13.304±1.29 15.358±5.10 22.560±7.51 5.330±1.74
ENSMUST00000135424 N/A N/A N/A N/A 3.914±0.00 N/A N/A N/A 5.712±0.00 N/A N/A 10.727±0.00 N/A N/A
ENSMUST00000141337 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 35.870±0.00 N/A N/A
ENSMUST00000149384 11.171±4.39 N/A 26.430±5.83 92.375±0.00 18.267±3.92 29.458±5.60 11.172±2.12 8.613±0.70 10.141±2.50 17.342±3.02 9.370±0.00 29.090±14.23 56.155±60.84 16.530±21.90
ENSMUST00000151323 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153442 7.205±4.07 N/A 45.175±10.96 40.254±17.30 8.573±1.40 N/A 9.107±1.03 5.582±2.19 24.144±18.59 18.321±3.70 16.113±1.47 32.532±7.20 29.130±7.00 4.551±0.72
ENSMUSG00000035364 ENSMUST00000046721 0.807±0.45 1.406±0.54 1.057±0.19 1.550±0.67 0.834±0.56 1.557±0.36 0.319±0.19 1.375±0.48 0.684±0.63 0.611±0.15 0.380±0.23 1.499±0.76 1.163±0.43 7.525±3.60
ENSMUSG00000091623 ENSMUST00000166606 5.845±3.94 13.293±3.19 54.302±4.55 105.270±6.12 15.247±2.83 19.355±7.32 3.058±0.00 7.018±3.44 63.058±67.72 13.064±3.23 N/A 36.036±4.43 59.744±0.67 7.737±0.11

Loading