C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: actin, gamma 2, smooth muscle, enteric
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000438902 ACTG2-005 ENSG00000163017 9606 + 2:73892314-73919675 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; LungMuscleTestisENST00000438902
Transcript ID Lung Muscle Testis
ENST00000438902 1.169±0.00 0.919±0.00 0.113±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000075161 Actg2-001 protein_coding Mus_musculus 0 1279
ENSMUST00000121731 Actg2-002 protein_coding Mus_musculus 0 1271
ENSDART00000055136 actc1b-201 protein_coding Danio_rerio 0 970
ENSMUST00000034453 Acta1-201 protein_coding Mus_musculus 0 944
ENSDART00000141737 actb2-001 protein_coding Danio_rerio 0 904
ENSDART00000055194 actb2-007 protein_coding Danio_rerio 0 904
ENSDART00000066430 acta2-201 protein_coding Danio_rerio 0 902
ENSDART00000149990 acta2-001 protein_coding Danio_rerio 0 902
ENSMUST00000039631 Acta2-201 protein_coding Mus_musculus 0 896
ENSDART00000058629 acta1b-001 protein_coding Danio_rerio 0 894
ENSDART00000062370 actc1a-001 protein_coding Danio_rerio 0 893
ENSDART00000080664 protein_coding Danio_rerio 0 893
ENSMUST00000090269 Actc1-001 protein_coding Mus_musculus 0 887
ENSMUST00000100497 Actb-001 protein_coding Mus_musculus 0 872
ENSMUST00000121430 Gm12715-001 processed_pseudogene Mus_musculus 0 867
ENSDART00000114549 hm:zewp0073-201 protein_coding Danio_rerio 0 865
ENSMUST00000106215 Actg1-201 protein_coding Mus_musculus 0 856
ENSMUST00000071555 Actg1-001 protein_coding Mus_musculus 0 856
ENSDART00000052838 acta1a-001 protein_coding Danio_rerio 0 846
ENSDART00000054987 actb1-001 protein_coding Danio_rerio 0 833
ENSDART00000109883 ACTC1 (2 of 2)-002 protein_coding Danio_rerio 0 815
ENSMUST00000082300 Gm8399-201 pseudogene Mus_musculus 0 797
ENSMUST00000141904 Actg2-005 protein_coding Mus_musculus 0 761
ENSMUST00000167721 Actb-002 protein_coding Mus_musculus 0 754
ENSMUST00000131103 Actg1-002 nonsense_mediated_decay Mus_musculus 0 704
ENSMUST00000078717 Lrrc58-001 protein_coding Mus_musculus 0 691
ENSMUST00000119947 Gm15725-001 transcribed_processed_pseudogene Mus_musculus 0 686
ENSDART00000134020 actb2-003 processed_transcript Danio_rerio 0 678
ENSMUST00000120059 Gm5388-001 processed_pseudogene Mus_musculus 0 645
ENSDART00000148290 actb2-002 nonsense_mediated_decay Danio_rerio 0 625
ENSMUST00000124933 Actg2-006 processed_transcript Mus_musculus 0 606
ENSDART00000133319 actb1-005 protein_coding Danio_rerio 0 580
ENSMUST00000146697 Gm8464-001 transcribed_processed_pseudogene Mus_musculus 0 560
ENSMUST00000140208 Gm8464-002 processed_transcript Mus_musculus 0 560
ENSMUST00000151942 Gm4750-001 transcribed_processed_pseudogene Mus_musculus 0 560
ENSMUST00000152262 Gm4750-002 processed_transcript Mus_musculus 0 560
ENSMUST00000118518 Gm12003-001 processed_pseudogene Mus_musculus 0 545
ENSMUST00000171419 Actb-007 protein_coding Mus_musculus 0 531
ENSMUST00000184255 Gm17087-001 translated_processed_pseudogene Mus_musculus 0 525
ENSMUST00000119420 Gm4918-001 processed_pseudogene Mus_musculus 0 503
ENSDART00000148067 actb1-003 processed_transcript Danio_rerio 0 490
ENSMUST00000152029 Actg2-004 protein_coding Mus_musculus 0 438
ENSMUST00000099636 Actg-ps1-201 processed_pseudogene Mus_musculus 0 398
ENSDART00000141407 actb1-002 protein_coding Danio_rerio 0 390
ENSMUST00000167386 Actb-003 processed_transcript Mus_musculus 0 361
ENSMUST00000062147 Actg1-006 protein_coding Mus_musculus 0 353
ENSMUST00000089616 Actg1-009 protein_coding Mus_musculus 0 244
ENSMUST00000119490 Gm14375-001 processed_pseudogene Mus_musculus 6e-28 130
ENSMUST00000177793 Gm15256-001 processed_pseudogene Mus_musculus 2e-27 128
ENSMUST00000122460 Gm14370-001 processed_pseudogene Mus_musculus 4e-24 117
ENSMUST00000177750 Gm15252-001 processed_pseudogene Mus_musculus 4e-24 117
ENSMUST00000178547 Gm14361-001 processed_pseudogene Mus_musculus 4e-24 117
ENSMUST00000147295 Gm7023-001 processed_pseudogene Mus_musculus 4e-24 117
ENSMUST00000179402 Gm15260-001 processed_pseudogene Mus_musculus 4e-24 117
ENSMUST00000177680 Gm15257-001 processed_pseudogene Mus_musculus 4e-24 117
ENSMUST00000177947 Gm15251-001 processed_pseudogene Mus_musculus 4e-24 117
ENSMUST00000122200 Gm14353-001 processed_pseudogene Mus_musculus 2e-22 111
ENSMUST00000142302 Gm15273-001 processed_pseudogene Mus_musculus 2e-22 111
ENSMUST00000178352 Gm14357-001 processed_pseudogene Mus_musculus 2e-22 111
ENSMUST00000179183 Gm14348-001 processed_pseudogene Mus_musculus 4e-19 100
ENSMUST00000060062 Actrt2-001 protein_coding Mus_musculus 0.00000002 66

Loading