C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000570019 RP11-602M11.3-001 ENSG00000259904 9606 - 15:34373541-34374603 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000570019
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000570019 0.307±0.00 0.159±0.00 0.139±0.00 0.022±0.00 0.098±0.08 0.016±0.00 0.079±0.00 0.031±0.00 0.108±0.00 0.177±0.00 0.132±0.07 0.090±0.00 0.132±0.02

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000100497 Actb-001 protein_coding Mus_musculus 0 878
ENSDART00000054987 actb1-001 protein_coding Danio_rerio 0 745
ENSMUST00000121430 Gm12715-001 processed_pseudogene Mus_musculus 0 701
ENSMUST00000106215 Actg1-201 protein_coding Mus_musculus 0 701
ENSMUST00000071555 Actg1-001 protein_coding Mus_musculus 0 701
ENSDART00000141737 actb2-001 protein_coding Danio_rerio 0 701
ENSDART00000055194 actb2-007 protein_coding Danio_rerio 0 701
ENSMUST00000167721 Actb-002 protein_coding Mus_musculus 0 695
ENSMUST00000082300 Gm8399-201 pseudogene Mus_musculus 0 660
ENSMUST00000034453 Acta1-201 protein_coding Mus_musculus 0 597
ENSMUST00000184255 Gm17087-001 translated_processed_pseudogene Mus_musculus 0 584
ENSDART00000133319 actb1-005 protein_coding Danio_rerio 0 584
ENSDART00000055136 actc1b-201 protein_coding Danio_rerio 0 579
ENSMUST00000171419 Actb-007 protein_coding Mus_musculus 0 564
ENSDART00000052838 acta1a-001 protein_coding Danio_rerio 0 556
ENSDART00000062370 actc1a-001 protein_coding Danio_rerio 0 551
ENSMUST00000146697 Gm8464-001 transcribed_processed_pseudogene Mus_musculus 0 547
ENSMUST00000140208 Gm8464-002 processed_transcript Mus_musculus 0 547
ENSMUST00000151942 Gm4750-001 transcribed_processed_pseudogene Mus_musculus 0 547
ENSMUST00000152262 Gm4750-002 processed_transcript Mus_musculus 0 547
ENSDART00000058629 acta1b-001 protein_coding Danio_rerio 0 545
ENSMUST00000090269 Actc1-001 protein_coding Mus_musculus 0 540
ENSDART00000080664 protein_coding Danio_rerio 0 536
ENSDART00000066430 acta2-201 protein_coding Danio_rerio 0 520
ENSDART00000149990 acta2-001 protein_coding Danio_rerio 0 520
ENSMUST00000131103 Actg1-002 nonsense_mediated_decay Mus_musculus 0 518
ENSDART00000114549 hm:zewp0073-201 protein_coding Danio_rerio 0 512
ENSDART00000134020 actb2-003 processed_transcript Danio_rerio 0 494
ENSMUST00000118518 Gm12003-001 processed_pseudogene Mus_musculus 0 472
ENSDART00000148290 actb2-002 nonsense_mediated_decay Danio_rerio 0 460
ENSDART00000138324 actb1-004 protein_coding Danio_rerio 0 446
ENSDART00000148067 actb1-003 processed_transcript Danio_rerio 0 398
ENSMUST00000167386 Actb-003 processed_transcript Mus_musculus 0 355
ENSDART00000141407 actb1-002 protein_coding Danio_rerio 0 342
ENSMUST00000106216 Actb-006 protein_coding Mus_musculus 0 291
ENSMUST00000062147 Actg1-006 protein_coding Mus_musculus 0 274
ENSMUST00000184183 Gm17087-002 protein_coding Mus_musculus 0 255
ENSMUST00000163829 Actb-004 protein_coding Mus_musculus 2.99878e-43 180

Loading