C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted pseudogene 6421
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000077016 Gm6421-201 ENSMUSG00000094518 10090 - 13:117358212-117358622 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000077016
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000077016 0.503±0.28 3.464±2.95 6.679±6.37 2.313±0.00 0.240±0.00 0.134±0.00 0.238±0.06 7.117±10.79 0.156±0.01 0.269±0.10 0.407±0.13 0.317±0.17 0.225±0.10

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000230495 H3F3AP6-001 processed_pseudogene Homo_sapiens 0 638
ENST00000321285 RP11-402J6.3-001 processed_pseudogene Homo_sapiens 0 590
ENST00000366813 H3F3A-002 protein_coding Homo_sapiens 0 654
ENST00000366814 H3F3A-003 protein_coding Homo_sapiens 0 442
ENST00000366815 H3F3A-001 protein_coding Homo_sapiens 0 654
ENST00000366816 H3F3A-004 protein_coding Homo_sapiens 0 654
ENST00000369387 H3F3AP4-001 processed_pseudogene Homo_sapiens 0 654
ENST00000404612 HIST1H3PS1-001 processed_pseudogene Homo_sapiens 0 514
ENST00000416267 RP11-349N19.2-001 processed_pseudogene Homo_sapiens 0 597
ENST00000416765 RP1-22N22.1-001 processed_pseudogene Homo_sapiens 0 534
ENST00000421430 RP11-4M23.4-001 processed_pseudogene Homo_sapiens 0 464
ENST00000440551 H3F3BP1-001 processed_pseudogene Homo_sapiens 0 606
ENST00000443015 AC133141.1-001 processed_pseudogene Homo_sapiens 0 318
ENST00000475267 H3F3AP5-001 processed_pseudogene Homo_sapiens 0 568
ENST00000496255 RP11-473P24.2-001 processed_pseudogene Homo_sapiens 0 427
ENST00000505098 CTC-505O3.1-001 processed_pseudogene Homo_sapiens 0 499
ENST00000509149 CTC-470C15.1-001 processed_pseudogene Homo_sapiens 0 279
ENST00000532005 RP11-745I13.1-001 processed_pseudogene Homo_sapiens 0 259
ENST00000559063 CTD-2651B20.2-001 processed_pseudogene Homo_sapiens 0 470
ENST00000559984 H3F3AP1-001 processed_pseudogene Homo_sapiens 0 335
ENST00000603240 RP11-27M5.1-001 processed_pseudogene Homo_sapiens 4e-37 158

Loading