C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 11989
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117240 Gm11989-001 ENSMUSG00000083553 10090 - 11:8383182-8383853 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastKidneyLiverLungOvaryPlacentaENSMUST00000117240
Transcript ID Adipose Bladder Brain Breast Kidney Liver Lung Ovary Placenta
ENSMUST00000117240 0.336±0.00 0.087±0.02 0.057±0.01 0.530±0.00 0.099±0.03 0.041±0.02 0.078±0.00 0.090±0.01 0.182±0.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000S7 CIL_0000S7_0002 CGP 11:7206086-8664535

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000393397 AC005042.2-001 processed_pseudogene Homo_sapiens 0 555
ENST00000396414 RP11-242C24.2-001 processed_pseudogene Homo_sapiens 0 532
ENST00000401715 RP3-486D24.1-001 processed_pseudogene Homo_sapiens 0 651
ENST00000418052 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 616
ENST00000423357 RPL7AP25-001 processed_pseudogene Homo_sapiens 0 381
ENST00000427056 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 638
ENST00000430506 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 632
ENST00000430732 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 616
ENST00000437448 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 616
ENST00000441433 RPL7AP38-001 processed_pseudogene Homo_sapiens 0 514
ENST00000445592 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 632
ENST00000451600 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 616
ENST00000453429 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 616
ENST00000473054 RP11-204K16.1-001 processed_pseudogene Homo_sapiens 0 595
ENST00000473913 RP11-463O9.1-001 processed_pseudogene Homo_sapiens 0 640
ENST00000476420 RPL7AP56-001 processed_pseudogene Homo_sapiens 0 315
ENST00000477943 RPL7AP6-001 processed_pseudogene Homo_sapiens 0 728
ENST00000483820 RPL7AP4-001 processed_pseudogene Homo_sapiens 0 501
ENST00000486538 RPL7AP11-001 processed_pseudogene Homo_sapiens 0 673
ENST00000496515 RPL7AP2-001 processed_pseudogene Homo_sapiens 0 521
ENST00000525465 RP11-58K22.2-001 processed_pseudogene Homo_sapiens 0 553
ENST00000541658 RPL7AP3-001 processed_pseudogene Homo_sapiens 0 451
ENST00000588490 RPL7AP66-001 processed_pseudogene Homo_sapiens 0 734

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