C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L7a pseudogene 60
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000469026 RPL7AP60-001 ENSG00000213152 9606 - 12:112301870-112302663 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000469026
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000469026 0.126±0.00 0.381±0.00 0.274±0.00 0.097±0.00 0.524±0.36 0.322±0.00 0.143±0.00 0.222±0.17 0.112±0.05 0.481±0.01 0.211±0.10 0.155±0.09 0.170±0.10 0.402±0.16

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000085365 Gm16477-001 processed_pseudogene Mus_musculus 0 841
ENSMUST00000118791 Rpl7a-ps11-001 processed_pseudogene Mus_musculus 0 835
ENSMUST00000190511 RP23-58N8.1-001 processed_pseudogene Mus_musculus 0 830
ENSMUST00000090170 Rpl7a-ps3-201 protein_coding Mus_musculus 0 830
ENSMUST00000102898 Rpl7a-001 protein_coding Mus_musculus 0 824
ENSMUST00000120676 Gm12712-001 processed_pseudogene Mus_musculus 0 819
ENSMUST00000190579 Rpl7a-ps10-001 processed_pseudogene Mus_musculus 0 802
ENSMUST00000094754 Rpl7a-ps8-201 protein_coding Mus_musculus 0 802
ENSMUST00000095218 Rpl7a-ps5-201 protein_coding Mus_musculus 0 797
ENSMUST00000183380 Gm17828-001 processed_pseudogene Mus_musculus 0 793
ENSMUST00000096427 Gm17415-001 processed_pseudogene Mus_musculus 0 785
ENSMUST00000189720 RP23-321G17.2-001 processed_pseudogene Mus_musculus 0 773
ENSMUST00000071172 RP23-58N8.4-001 processed_pseudogene Mus_musculus 0 765
ENSMUST00000145247 Gm6286-001 processed_pseudogene Mus_musculus 0 763
ENSMUST00000191231 RP24-217I2.2-001 processed_pseudogene Mus_musculus 0 763
ENSMUST00000162120 Gm7418-001 processed_pseudogene Mus_musculus 0 758
ENSMUST00000119745 Gm13864-001 processed_pseudogene Mus_musculus 0 737
ENSMUST00000117398 Gm8250-001 processed_pseudogene Mus_musculus 0 734
ENSMUST00000120384 Rpl7a-ps12-001 processed_pseudogene Mus_musculus 0 734
ENSMUST00000151645 Gm7847-001 processed_pseudogene Mus_musculus 0 728
ENSMUST00000171235 Gm5459-001 processed_pseudogene Mus_musculus 0 719
ENSMUST00000120032 Gm13666-001 processed_pseudogene Mus_musculus 0 712
ENSMUST00000122355 Gm11760-001 processed_pseudogene Mus_musculus 0 712
ENSMUST00000121278 Gm13726-001 processed_pseudogene Mus_musculus 0 708
ENSMUST00000119589 Gm16071-001 processed_pseudogene Mus_musculus 0 704
ENSMUST00000136269 Rpl7a-002 processed_transcript Mus_musculus 0 682
ENSMUST00000185009 Gm14214-001 translated_processed_pseudogene Mus_musculus 0 680
ENSMUST00000119952 Gm15836-001 processed_pseudogene Mus_musculus 0 675
ENSMUST00000165944 RP24-170M24.1-001 processed_pseudogene Mus_musculus 0 665
ENSMUST00000139800 Gm5353-001 processed_pseudogene Mus_musculus 0 664
ENSMUST00000118291 Gm16166-001 processed_pseudogene Mus_musculus 0 656
ENSMUST00000137376 Rpl7a-004 processed_transcript Mus_musculus 0 632
ENSMUST00000117439 Gm12385-001 processed_pseudogene Mus_musculus 0 625
ENSMUST00000120504 Gm12124-001 processed_pseudogene Mus_musculus 0 599
ENSMUST00000118838 Gm11362-001 processed_pseudogene Mus_musculus 0 593
ENSMUST00000118766 Gm16198-001 processed_pseudogene Mus_musculus 0 590
ENSMUST00000188170 RP23-248N10.1-001 processed_pseudogene Mus_musculus 0 558
ENSMUST00000118615 Gm13183-001 processed_pseudogene Mus_musculus 0 555
ENSMUST00000117118 Rpl7a-ps9-001 processed_pseudogene Mus_musculus 0 553
ENSMUST00000120981 Gm12593-001 processed_pseudogene Mus_musculus 0 507
ENSMUST00000118582 Gm14082-001 processed_pseudogene Mus_musculus 0 477
ENSMUST00000143678 Rpl7a-003 processed_transcript Mus_musculus 0 438
ENSMUST00000117289 Gm16394-001 processed_pseudogene Mus_musculus 0 313
ENSMUST00000117903 Gm8097-001 processed_pseudogene Mus_musculus 0 281
ENSMUST00000171395 Gm8425-001 processed_pseudogene Mus_musculus 6e-34 148
ENSMUST00000121375 Gm11925-001 processed_pseudogene Mus_musculus 0.00000000001 75
ENSMUST00000119982 Gm15007-001 processed_pseudogene Mus_musculus 0.00000000004 73
ENSMUST00000119680 Gm15702-001 processed_pseudogene Mus_musculus 0.000000002 68

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